RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SLITRK1Q96PX8 696 aa17.96■□□□□ 0.47
HDDC3-206ENST00000561036 RAB17Q9H0T7 212 aa17.96■□□□□ 0.47
HDDC3-206ENST00000561036 CSNK1G1Q9HCP0 422 aa17.96■□□□□ 0.47
HDDC3-206ENST00000561036 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
HDDC3-206ENST00000561036 HSF2BPO75031 334 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 TADA2AO75478 443 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 TJP3O95049 919 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 TRUB2O95900 331 aaKnown RBP17.95■□□□□ 0.46
HDDC3-206ENST00000561036 CLTBP09497 229 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 RALAP11233 206 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 TCF4P15884 667 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 MIPP30301 263 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 GJC1P36383 396 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 DR1Q01658 176 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 GUCY2DQ02846 1103 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 YWHAHQ04917 246 aaPredicted RBP17.95■□□□□ 0.46
HDDC3-206ENST00000561036 KLF1Q13351 362 aaPredicted RBP17.95■□□□□ 0.46
HDDC3-206ENST00000561036 CUL1Q13616 776 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 TAZQ16635 292 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 TCTN1Q2MV58 587 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 CCDC14Q49A88 953 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 TRNP1Q6NT89 227 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 SPOCD1Q6ZMY3 1216 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 ADAT2Q7Z6V5 191 aaKnown RBP17.95■□□□□ 0.46
HDDC3-206ENST00000561036 ZDHHC14Q8IZN3 488 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 CMASQ8NFW8 434 aaPredicted RBP17.95■□□□□ 0.46
HDDC3-206ENST00000561036 HASPINQ8TF76 798 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 SEC14L1Q92503 715 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 SLCO2A1Q92959 643 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 MYLPFQ96A32 169 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 PIWIL1Q96J94 861 aaKnown RBP17.95■□□□□ 0.46
HDDC3-206ENST00000561036 DDX23Q9BUQ8 820 aaKnown RBP17.95■□□□□ 0.46
HDDC3-206ENST00000561036 PPP1R12CQ9BZL4 782 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 NRDE2Q9H7Z3 1164 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 EPB41L5Q9HCM4 733 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 ZNF446Q9NWS9 450 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 AMACRQ9UHK6 382 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 FEZ2Q9UHY8 353 aaPredicted RBP17.95■□□□□ 0.46
HDDC3-206ENST00000561036 RASAL2Q9UJF2 1139 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 USP18Q9UMW8 372 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 ATP11BQ9Y2G3 1177 aa17.95■□□□□ 0.46
HDDC3-206ENST00000561036 TTC3P53804 2025 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 TCRBV7S2A1N4TA0A589 114 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 ZMYND10O75800 440 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 ALDH2P05091 517 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 COILP38432 576 aaPredicted RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 MAP3K7CLP57077 242 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 MRPS5P82675 430 aaKnown RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 ADIGQ0VDE8 80 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 ELAVL2Q12926 359 aaKnown RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 IKBKEQ14164 716 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 BOLA3Q53S33 107 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 TFDP3Q5H9I0 405 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 RAB41Q5JT25 222 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 C4orf50Q6ZRC1 276 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 SYDE1Q6ZW31 735 aaPredicted RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 SIX6OS1Q8N1H7 587 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 SCML4Q8N228 414 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 DIS3LQ8TF46 1054 aaKnown RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 TEKT4Q8WW24 435 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 CENPIQ92674 756 aaPredicted RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 RNF25Q96BH1 459 aaPredicted RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 TBCBQ99426 244 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 SMOQ99835 787 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 C11orf84Q9BUA3 381 aaPredicted RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 PNPLA8Q9NP80 782 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 CNGB3Q9NQW8 809 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 DNAJB4Q9UDY4 337 aa17.94■□□□□ 0.46
HDDC3-206ENST00000561036 UTP11Q9Y3A2 253 aaKnown RBP17.94■□□□□ 0.46
HDDC3-206ENST00000561036 LRRD1A4D1F6 860 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 C3orf70A6NLC5 250 aaPredicted RBP17.93■□□□□ 0.46
HDDC3-206ENST00000561036 NRP1O14786 923 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 PRPSAP2O60256 369 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 DAB1O75553 588 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 GRAP2O75791 330 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 BEST1O76090 585 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 IL1R2P27930 398 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 GBP1P32455 592 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 CDKN2BP42772 138 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 PTGIRP43119 386 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 CTCFP49711 727 aaPredicted RBP17.93■□□□□ 0.46
HDDC3-206ENST00000561036 EPHB4P54760 987 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 DRG2P55039 364 aaKnown RBP17.93■□□□□ 0.46
HDDC3-206ENST00000561036 ADCY1Q08828 1119 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 NNTQ13423 1086 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 TAF5Q15542 800 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 CCNG2Q16589 344 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 CCDC142Q17RM4 750 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 ATP13A4Q4VNC1 1196 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 EMBQ6PCB8 327 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 CCDC137Q6PK04 289 aaKnown RBP17.93■□□□□ 0.46
HDDC3-206ENST00000561036 MFSD7Q6UXD7 560 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 HDXQ7Z353 690 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 VSIG1Q86XK7 387 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 DCP1BQ8IZD4 617 aaKnown RBP17.93■□□□□ 0.46
HDDC3-206ENST00000561036 LRRC43Q8N309 656 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 OR10T2Q8NGX3 314 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 AENQ8WTP8 325 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms