RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SLC22A12Q96S37 553 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 HNRNPABQ99729 332 aaKnown RBP13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 TTLL2Q9BWV7 592 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 NACA2Q9H009 215 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 LTB4R2Q9NPC1 389 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 GKN1Q9NS71 199 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 GTSE1Q9NYZ3 720 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 CHORDC1Q9UHD1 332 aaPredicted RBP13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 DACH1Q9UI36 760 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 COQ4Q9Y3A0 265 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 COL4A3Q01955 1670 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 BEST1O76090 585 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 AFPP02771 609 aaKnown RBP13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 TBXAS1P24557 533 aaPredicted RBP13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 TNK2Q07912 1038 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 PPP1R26Q5T8A7 1209 aaPredicted RBP13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 CCDC105Q8IYK2 499 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 PPM1KQ8N3J5 372 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 DTWD2Q8NBA8 298 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 WHAMMQ8TF30 809 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 NELL2Q99435 816 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 SMOQ99835 787 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 IRF2BPLQ9H1B7 796 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 FBXO44Q9H4M3 255 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 TRPV5Q9NQA5 729 aa13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 MTF2Q9Y483 593 aaPredicted RBP13.73□□□□□ -0.21
CTDSPL2-209ENST00000560620 MIA3Q5JRA6 1907 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 ZNF840PA6NDX5 716 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 MBL2P11226 248 aaPredicted RBP13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 GLULP15104 373 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 CD19P15391 556 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 ACO1P21399 889 aaKnown RBP13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 MTIF2P46199 727 aaKnown RBP13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 SOX9P48436 509 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 IFNAR2P48551 515 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 RAD23BP54727 409 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 SLC8A3P57103 927 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 NHLH1Q02575 133 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 TCF15Q12870 199 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 ZNF268Q14587 947 aaPredicted RBP13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 MTF1Q14872 753 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 ITPRIPL2Q3MIP1 535 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 TRIM68Q6AZZ1 485 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 CLEC20AQ6ZU45 233 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 TRIM59Q8IWR1 403 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 SH3RF2Q8TEC5 729 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 CNOT6LQ96LI5 555 aaKnown RBP13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 DDX23Q9BUQ8 820 aaKnown RBP13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 EBF3Q9H4W6 596 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 C8orf33Q9H7E9 229 aaPredicted RBP13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 CSNK1G1Q9HCP0 422 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 FAM86C1Q9NVL1 165 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 SPATA6Q9NWH7 488 aaPredicted RBP13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 SMPD4Q9NXE4 827 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 ANAPC1Q9H1A4 1944 aa13.72□□□□□ -0.21
CTDSPL2-209ENST00000560620 SPECC1L-ADORA2AF8WAN1 911 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 ARNTLO00327 626 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 TNFRSF10BO14763 440 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 P4HA2O15460 535 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 TARSP26639 723 aaKnown RBP13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 MARSP56192 900 aaKnown RBP13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 RUNX3Q13761 415 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 ANGPT1Q15389 498 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 SLC4A11Q8NBS3 891 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 ZMIZ2Q8NF64 920 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 OVCA2Q8WZ82 227 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 OSBPL6Q9BZF3 934 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 FAM124BQ9H5Z6 455 aaPredicted RBP13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 TLR8Q9NR97 1041 aaKnown RBP13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 COMMD8Q9NX08 183 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 DUS2Q9NX74 493 aaKnown RBP13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 GMIPQ9P107 970 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 GCNT4Q9P109 453 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 HESX1Q9UBX0 185 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 PCDHB4Q9Y5E5 795 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 CPQQ9Y646 472 aa13.71□□□□□ -0.21
CTDSPL2-209ENST00000560620 PES1O00541 588 aaKnown RBP13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 PFKLP17858 780 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 PDGFRLQ15198 375 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 ZNF77Q15935 545 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 GOLGA7BQ2TAP0 167 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 SGO2Q562F6 1265 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 HSP90AA4PQ58FG1 418 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 HECTD3Q5T447 861 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 C1orf228Q6PIY5 440 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 RRAGAQ7L523 313 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 GPRIN1Q7Z2K8 1008 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 RALGPS2Q86X27 583 aaPredicted RBP13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 EHBP1Q8NDI1 1231 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 MSANTD3Q96H12 275 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 DUSP16Q9BY84 665 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 RNF38Q9H0F5 515 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 CCSER2Q9H7U1 834 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 ARHGAP26Q9UNA1 814 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 WNT6Q9Y6F9 365 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 MYO16Q9Y6X6 1858 aa13.7□□□□□ -0.22
CTDSPL2-209ENST00000560620 LEFTY2O00292 366 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms