RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 CFAP221Q4G0U5 840 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 PTPN20Q4JDL3 420 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 SLC39A12Q504Y0 691 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 EFHC1Q5JVL4 640 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 FAM102AQ5T9C2 384 aaPredicted RBP6.77□□□□□ -1.33
SPG11-221ENST00000560299 OR6B2Q6IFH4 312 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 TMEM184AQ6ZMB5 413 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 PEX26Q7Z412 305 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 TMCO2Q7Z6W1 182 aaPredicted RBP6.77□□□□□ -1.33
SPG11-221ENST00000560299 FAM35AQ86V20 835 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 TTC30AQ86WT1 665 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 VPS52Q8N1B4 723 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 SIX6OS1Q8N1H7 587 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 WDTC1Q8N5D0 677 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 FBXO22Q8NEZ5 403 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 OR10T2Q8NGX3 314 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 TPCN2Q8NHX9 752 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.77□□□□□ -1.33
SPG11-221ENST00000560299 FEZF2Q8TBJ5 459 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 PIK3R5Q8WYR1 880 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 KCTD13Q8WZ19 329 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 GOLGA1Q92805 767 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 PPP2R3CQ969Q6 453 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 MYLPFQ96A32 169 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 CPXM1Q96SM3 734 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 NCAPGQ9BPX3 1015 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 RTP3Q9BQQ7 232 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 HERC2P3Q9BVR0 1158 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 SLC4A5Q9BY07 1137 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 B3GNT5Q9BYG0 378 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 NKX2-4Q9H2Z4 354 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 ABCB6Q9NP58 842 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 DMAP1Q9NPF5 467 aaPredicted RBP6.77□□□□□ -1.33
SPG11-221ENST00000560299 CHST7Q9NS84 486 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 KRT82Q9NSB4 513 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 EHD2Q9NZN4 543 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 TRIM10Q9UDY6 481 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 IP6K2Q9UHH9 426 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 ANAPC7Q9UJX3 599 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 AMFRQ9UKV5 643 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 MAFFQ9ULX9 164 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 TFR2Q9UP52 801 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 COG5Q9UP83 839 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.77□□□□□ -1.33
SPG11-221ENST00000560299 NME7Q9Y5B8 376 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 PCDHGC5Q9Y5F6 944 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 MTCH2Q9Y6C9 303 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 TTC28Q96AY4 2481 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 A0A0C4DFX4 3053 aa6.77□□□□□ -1.33
SPG11-221ENST00000560299 CUL9Q8IWT3 2517 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 A0A0U1RQJ8 604 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 LCHNA4D1U4 455 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 MIF4GDA9UHW6 222 aaKnown RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 E5RJQ4 531 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 GOLGA8SH3BPF8 625 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CLDN5O00501 218 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 HCRTO43612 131 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 SPOPO43791 374 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PALMO75781 387 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 RNF8O76064 485 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 FGF18O76093 207 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 ABL1P00519 1130 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 GLI1P08151 1106 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 LCP1P13796 627 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 TCP1P17987 556 aaKnown RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 ELF1P32519 619 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CA8P35219 290 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CTNNB1P35222 781 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 MAGEA11P43364 429 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 RPL34P49207 117 aaKnown RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 TUFMP49411 452 aaKnown RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 RGS7P49802 495 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 ARPP19P56211 112 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 RPL10AP62906 217 aaKnown RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 SLC6A3Q01959 620 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 DSG1Q02413 1049 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PTP4A2Q12974 167 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 MAMLD1Q13495 774 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PIGHQ14442 188 aaPredicted RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 MESDQ14696 234 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 RPS6KA1Q15418 735 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CTC1Q2NKJ3 1217 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PUS10Q3MIT2 529 aaKnown RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 ODF2Q5BJF6 829 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 RTP2Q5QGT7 225 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CYP4A22Q5TCH4 519 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 KIAA0319Q5VV43 1072 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 TPGS2Q68CL5 300 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 SLC8B1Q6J4K2 584 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 C11orf63Q6NUN7 778 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PMF1Q6P1K2 205 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CLEC20AQ6ZU45 233 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PAQR9Q6ZVX9 377 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 ARCQ7LC44 396 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PIGZQ86VD9 579 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 XYLT1Q86Y38 959 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 DNAAF5Q86Y56 855 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 SLC35F6Q8N357 371 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 MICALL1Q8N3F8 863 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms