RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 PPP1R2P3Q6NXS1 205 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 DENND1BQ6P3S1 775 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 SMRP1Q8NCR6 262 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 GPR152Q8TDT2 470 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 TTLL2Q9BWV7 592 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 MIS12Q9H081 205 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 LRRC4Q9HBW1 653 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 AVENQ9NQS1 362 aaPredicted RBP12.94□□□□□ -0.34
USP8-209ENST00000560297 ASAH2Q9NR71 780 aa12.94□□□□□ -0.34
USP8-209ENST00000560297 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
USP8-209ENST00000560297 SZT2Q5T011 3432 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 FAM92AA1XBS5 289 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 CYP1A1P04798 512 aaPredicted RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 RHOP08100 348 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 CFHP08603 1231 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 SKILP12757 684 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 HMGA1P17096 107 aaKnown RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 RPL34P49207 117 aaKnown RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 KIF11P52732 1056 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 SLC5A3P53794 718 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 EPHA5P54756 1037 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 GSDMDP57764 484 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 PUS10Q3MIT2 529 aaKnown RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 TDRD12Q587J7 1177 aaKnown RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 E4F1Q66K89 784 aaPredicted RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 HGSNATQ68CP4 663 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 PMF1Q6P1K2 205 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 ZNF571Q7Z3V5 609 aaPredicted RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 GRASPQ7Z6J2 395 aaPredicted RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 TMEM110Q86TL2 294 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 PASD1Q8IV76 773 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 SCML4Q8N228 414 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 WDTC1Q8N5D0 677 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 TC2NQ8N9U0 490 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 SPC24Q8NBT2 197 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 MSANTD4Q8NCY6 345 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 OVCA2Q8WZ82 227 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 NECTIN4Q96NY8 510 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 SLITRK1Q96PX8 696 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 CORO1BQ9BR76 489 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 SYT11Q9BT88 431 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 MAGED2Q9UNF1 606 aaPredicted RBP12.93□□□□□ -0.34
USP8-209ENST00000560297 USP3Q9Y6I4 520 aa12.93□□□□□ -0.34
USP8-209ENST00000560297 SSU72P8A0A1W2PR75 194 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 H3BQ06 376 aaPredicted RBP12.92□□□□□ -0.34
USP8-209ENST00000560297 FBXO21O94952 628 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 GZMAP12544 262 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 CDC25CP30307 473 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 TKTL1P51854 596 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 SMAD4Q13485 552 aaKnown RBP12.92□□□□□ -0.34
USP8-209ENST00000560297 MTMR3Q13615 1198 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 LEXMQ3ZCV2 418 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 PM20D1Q6GTS8 502 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 WDR59Q6PJI9 974 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 PDZD4Q76G19 769 aaPredicted RBP12.92□□□□□ -0.34
USP8-209ENST00000560297 ERICH1Q86X53 443 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 GPIHBP1Q8IV16 184 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 SIX6OS1Q8N1H7 587 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 PDZD8Q8NEN9 1154 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 SCAMP5Q8TAC9 235 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 PPP1R13BQ96KQ4 1090 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 APOL5Q9BWW9 433 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 LRRC3Q9BY71 257 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 WDR6Q9NNW5 1121 aaKnown RBP12.92□□□□□ -0.34
USP8-209ENST00000560297 CNGB3Q9NQW8 809 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 SEPT11Q9NVA2 429 aaKnown RBP12.92□□□□□ -0.34
USP8-209ENST00000560297 SCML2Q9UQR0 700 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 FAM50BQ9Y247 325 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 SSUH2Q9Y2M2 353 aa12.92□□□□□ -0.34
USP8-209ENST00000560297 SOBPA7XYQ1 873 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 TULP2O00295 520 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 SART1O43290 800 aaKnown RBP12.91□□□□□ -0.34
USP8-209ENST00000560297 ZBED1O96006 694 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 F11P03951 625 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 MYL4P12829 197 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 UNGP13051 313 aaPredicted RBP12.91□□□□□ -0.34
USP8-209ENST00000560297 PSEN1P49768 467 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 RGS7P49802 495 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 USP46P62068 366 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 NOMO3P69849 1222 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 TAF10Q12962 218 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 PDCLQ13371 301 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 CLEC16AQ2KHT3 1053 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 AAK1Q2M2I8 961 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 NAA35Q5VZE5 725 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 ACAD10Q6JQN1 1059 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 CCDC186Q7Z3E2 898 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 MON1AQ86VX9 555 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 TMC8Q8IU68 726 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 ZDHHC17Q8IUH5 632 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 HS6ST3Q8IZP7 471 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 ARHGAP18Q8N392 663 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 C1orf131Q8NDD1 294 aaKnown RBP12.91□□□□□ -0.34
USP8-209ENST00000560297 SLC30A5Q8TAD4 765 aa12.91□□□□□ -0.34
USP8-209ENST00000560297 IPO4Q8TEX9 1081 aaKnown RBP12.91□□□□□ -0.34
USP8-209ENST00000560297 CPA5Q8WXQ8 436 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms