RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 PASD1Q8IV76 773 aa23■■□□□ 1.27
SNX1-210ENST00000560260 NUP93Q8N1F7 819 aa23■■□□□ 1.27
SNX1-210ENST00000560260 SLC35F5Q8WV83 523 aa23■■□□□ 1.27
SNX1-210ENST00000560260 CPLX3Q8WVH0 158 aa23■■□□□ 1.27
SNX1-210ENST00000560260 ATXN2LQ8WWM7 1075 aaKnown RBP23■■□□□ 1.27
SNX1-210ENST00000560260 ING5Q8WYH8 240 aa23■■□□□ 1.27
SNX1-210ENST00000560260 IL37Q9NZH6 218 aa23■■□□□ 1.27
SNX1-210ENST00000560260 CAPN11Q9UMQ6 739 aa23■■□□□ 1.27
SNX1-210ENST00000560260 DOCK8Q8NF50 2099 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 A0A1W2PRU2 124 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 F11P03951 625 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 MMEP08473 750 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 GABRR2P28476 465 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 RGS7P49802 495 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 MRPS5P82675 430 aaKnown RBP22.99■■□□□ 1.27
SNX1-210ENST00000560260 PUS10Q3MIT2 529 aaKnown RBP22.99■■□□□ 1.27
SNX1-210ENST00000560260 RAB41Q5JT25 222 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 IRF2BP2Q7Z5L9 587 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 WDTC1Q8N5D0 677 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 MYADMQ96S97 322 aa22.99■■□□□ 1.27
SNX1-210ENST00000560260 FERP16591 822 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 SP100P23497 879 aaPredicted RBP22.98■■□□□ 1.27
SNX1-210ENST00000560260 CASP14P31944 242 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 KIF11P52732 1056 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 CYP4F8P98187 520 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 FMO1Q01740 532 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 GOLGA8FQ08AF8 430 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 GOLGA8DPQ0D2H9 430 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 TAF12Q16514 161 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 STXBP5Q5T5C0 1151 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 PMF1Q6P1K2 205 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 TMC6Q7Z403 805 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 LEMD2Q8NC56 503 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 MRFAP1L1Q96HT8 127 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 ASB2Q96Q27 587 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 SYT11Q9BT88 431 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 UBXN6Q9BZV1 441 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 MRPS23Q9Y3D9 190 aaKnown RBP22.98■■□□□ 1.27
SNX1-210ENST00000560260 DENND4CQ5VZ89 1909 aa22.98■■□□□ 1.27
SNX1-210ENST00000560260 FAM92AA1XBS5 289 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 BMP1P13497 986 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 PGFP49763 221 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 ZBED6P86452 979 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 TAF10Q12962 218 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 TBX2Q13207 712 aaPredicted RBP22.97■■□□□ 1.27
SNX1-210ENST00000560260 TEAD2Q15562 447 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 ASIC2Q16515 512 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 AAK1Q2M2I8 961 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 CYP4A22Q5TCH4 519 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 NPAS3Q8IXF0 933 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 C1orf131Q8NDD1 294 aaKnown RBP22.97■■□□□ 1.27
SNX1-210ENST00000560260 IQCDQ96DY2 449 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 PHF7Q9BWX1 381 aaPredicted RBP22.97■■□□□ 1.27
SNX1-210ENST00000560260 AIPL1Q9NZN9 384 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.97■■□□□ 1.273e-7■■□□□ 12.3
SNX1-210ENST00000560260 USP3Q9Y6I4 520 aa22.97■■□□□ 1.27
SNX1-210ENST00000560260 ANAPC1Q9H1A4 1944 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 FAM170AA1A519 330 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 PIK3R2O00459 728 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 RTN3O95197 1032 aaPredicted RBP22.96■■□□□ 1.27
SNX1-210ENST00000560260 YWHAQP27348 245 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 CDR2Q01850 454 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 SFMBT2Q5VUG0 894 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 BHLHA9Q7RTU4 235 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.96■■□□□ 1.27
SNX1-210ENST00000560260 KCTD13Q8WZ19 329 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 FBXO32Q969P5 355 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 LHX5Q9H2C1 402 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 ATXN3LQ9H3M9 355 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 GMIPQ9P107 970 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 UXTQ9UBK9 157 aaPredicted RBP22.96■■□□□ 1.27
SNX1-210ENST00000560260 TJP2Q9UDY2 1190 aa22.96■■□□□ 1.27
SNX1-210ENST00000560260 C2CD4DB7Z1M9 353 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 KRT9P35527 623 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 RPL34P49207 117 aaKnown RBP22.95■■□□□ 1.26
SNX1-210ENST00000560260 SLC8A3P57103 927 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 ADIGQ0VDE8 80 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 PDCLQ13371 301 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 TRIM14Q14142 442 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 FGF13Q92913 245 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 PCDHB18PQ96TA0 734 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 ULBP1Q9BZM6 244 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 COMMD8Q9NX08 183 aa22.95■■□□□ 1.26
SNX1-210ENST00000560260 TCF20Q9UGU0 1960 aaKnown RBP22.95■■□□□ 1.26
SNX1-210ENST00000560260 ZNF197O14709 1029 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 CDC25CP30307 473 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 CDH5P33151 784 aaPredicted RBP22.94■■□□□ 1.26
SNX1-210ENST00000560260 PRKCIP41743 596 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 TKTL1P51854 596 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 NOMO3P69849 1222 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 HGSNATQ68CP4 663 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 ZNF677Q86XU0 584 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 NDRG1Q92597 394 aaKnown RBP22.94■■□□□ 1.26
SNX1-210ENST00000560260 HSFY1Q96LI6 401 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 ZSWIM3Q96MP5 696 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 SLC4A5Q9BY07 1137 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 SCML2Q9UQR0 700 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 FAM50BQ9Y247 325 aa22.94■■□□□ 1.26
SNX1-210ENST00000560260 LUC7L2Q9Y383 392 aaKnown RBP22.94■■□□□ 1.26
SNX1-210ENST00000560260 ZNF840PA6NDX5 716 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms