RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 KPNA1P52294 538 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 SLC5A3P53794 718 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 MAP3K7CLP57077 242 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 LRMPQ12912 555 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 PAK1Q13153 545 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 ZNF268Q14587 947 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 CCDC40Q4G0X9 1142 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 GPRIN1Q7Z2K8 1008 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 FRMD5Q7Z6J6 570 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 ALYREFQ86V81 257 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 MAML2Q8IZL2 1156 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 CCDC150Q8NCX0 1101 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 FAM3CQ92520 227 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 JAKMIP2Q96AA8 810 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 CLDN23Q96B33 292 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 FAM83CQ9BQN1 747 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 OSBPL6Q9BZF3 934 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 EBF3Q9H4W6 596 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 CSNK1G1Q9HCP0 422 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 HPS4Q9NQG7 708 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 CISHQ9NSE2 258 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 IL37Q9NZH6 218 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 HHLA1C9JL84 531 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 MAN2B1O00754 1011 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 SCAMP3O14828 347 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 YWHAQP27348 245 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 CTHP32929 405 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 FMO5P49326 533 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 RAD23BP54727 409 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 PLCB2Q00722 1185 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 USP4Q13107 963 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 MTF1Q14872 753 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 ZNF77Q15935 545 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 PPP1R26Q5T8A7 1209 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 FOXR2Q6PJQ5 311 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 CLEC20AQ6ZU45 233 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 C1orf210Q8IVY1 113 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 TRIML1Q8N9V2 468 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 SLC4A11Q8NBS3 891 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 SH3RF2Q8TEC5 729 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 FBXO32Q969P5 355 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 CHFRQ96EP1 664 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 CYFIP2Q96F07 1278 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 NELL2Q99435 816 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 HNRNPABQ99729 332 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 SRRTQ9BXP5 876 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 CLSTN2Q9H4D0 955 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 KIF9Q9HAQ2 790 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 METTL14Q9HCE5 456 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 THG1LQ9NWX6 298 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 GMIPQ9P107 970 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 WNT6Q9Y6F9 365 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 FRYLO94915 3013 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 MYO16Q9Y6X6 1858 aa12.34□□□□□ -0.43
RABGGTA-216ENST00000560243 ATG2BQ96BY7 2078 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 BICDL2A1A5D9 508 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 RTN3O95197 1032 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 OLFM2O95897 454 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 OAS1P00973 400 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 FAM200BP0CF97 657 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 CHRNB1P11230 501 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 MRE11P49959 708 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 CUL2Q13617 745 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 ITPRIPL2Q3MIP1 535 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 NAIF1Q69YI7 327 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 TRIM59Q8IWR1 403 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 KAT5Q92993 513 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 HEXIM2Q96MH2 286 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 SLITRK1Q96PX8 696 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 LINC00597Q9H2U6 94 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 C8orf33Q9H7E9 229 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 LMAN1LQ9HAT1 526 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 RBM12Q9NTZ6 932 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 LMBRD1Q9NUN5 540 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 SPATA6Q9NWH7 488 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 SMPD4Q9NXE4 827 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 EHD2Q9NZN4 543 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 ARHGAP26Q9UNA1 814 aa12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-216ENST00000560243 EP300Q09472 2414 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 PTPRZ1P23471 2315 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 FAM92AA1XBS5 289 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 LEFTY2O00292 366 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 COCHO43405 550 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 RPS9P46781 194 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 PPP3CCP48454 512 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 SLC7A9P82251 487 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 MTAPQ13126 283 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 RUNX3Q13761 415 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 GAS6Q14393 721 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 PON2Q15165 354 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 CC2D1AQ6P1N0 951 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 RALGPS2Q86X27 583 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 UBR7Q8N806 425 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms