RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RESTQ13127 1097 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 CFAP221Q4G0U5 840 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 RHBDF2Q6PJF5 856 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 TOGARAM2Q6ZUX3 1019 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 GLRX5Q86SX6 157 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 OSTM1Q86WC4 334 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 SCN4BQ8IWT1 228 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 KIAA1958Q8N8K9 716 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 ZNF560Q96MR9 790 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 KIF2CQ99661 725 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 RNF38Q9H0F5 515 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 CALCOCO1Q9P1Z2 691 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 DKK4Q9UBT3 224 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 NOL7Q9UMY1 257 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 TISP43B9A030 160 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 PRB1P04280 392 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 PFKLP17858 780 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 USP46P62068 366 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 SLC7A9P82251 487 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 PLEKHG6Q3KR16 790 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 SCARA3Q6AZY7 606 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 DTHD1Q6ZMT9 781 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 TRIML1Q8N9V2 468 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 FBXO18Q8NFZ0 1043 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 HSPA12BQ96MM6 686 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 REEP2Q9BRK0 252 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 HCN2Q9UL51 889 aa13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 APOBEC2Q9Y235 224 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 TP53BP1Q12888 1972 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-213ENST00000560127 MYLKQ15746 1914 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 LAD1O00515 517 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 OLFM2O95897 454 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 ADH5P11766 374 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 SCP2P22307 547 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 PRPHP41219 470 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 PNPLA4P41247 253 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 MAGEA11P43364 429 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 ANAPC15P60006 121 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 MYL7Q01449 175 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 ADALQ6DHV7 355 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 CRELD2Q6UXH1 353 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 TMPRSS7Q7RTY8 843 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 SPATA2LQ8IUW3 424 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 TMEM86AQ8N2M4 240 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 MYCT1Q8N699 235 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 ZNF419Q96HQ0 510 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 FUBP3Q96I24 572 aaKnown RBP eCLIP13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 FIZ1Q96SL8 496 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 SMPD4Q9NXE4 827 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 KIAA1522Q9P206 1035 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 AGO2Q9UKV8 859 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 PCOLCE2Q9UKZ9 415 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 ODF2LQ9ULJ1 636 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 CPQQ9Y646 472 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 STYXL1Q9Y6J8 313 aa13.71□□□□□ -0.21
RABGGTA-213ENST00000560127 A0A1W2PQF6 199 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 ZNF840PA6NDX5 716 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 SLC9A3R1O14745 358 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 HUS1O60921 280 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 C1QL1O75973 258 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 ADH1CP00326 375 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 POLR2BP30876 1174 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 ZNF131P52739 623 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 WNT7BP56706 349 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 GTF2BQ00403 316 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 POU5F1Q01860 360 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 C19orf57Q0VDD7 668 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 GRIK2Q13002 908 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 GNL2Q13823 731 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 TMEM119Q4V9L6 283 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 LY6G5CQ5SRR4 150 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 FAM171BQ6P995 826 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 MIB1Q86YT6 1006 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 KCTD17Q8N5Z5 321 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 ZNF513Q8N8E2 541 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 KCNV2Q8TDN2 545 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 SPATA17Q96L03 361 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 IKZF4Q9H2S9 585 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 CD93Q9NPY3 652 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 TOR4AQ9NXH8 423 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 CFAP97Q9P2B7 532 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 CYP8B1Q9UNU6 501 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 AGAP1Q9UPQ3 857 aa13.7□□□□□ -0.22
RABGGTA-213ENST00000560127 MUC22E2RYF6 1773 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 A0A087WV48 116 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 GABRDO14764 452 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 TRAK2O60296 914 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 ATP2C2O75185 946 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 ZNF217O75362 1048 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 DKK1O94907 266 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 ITGB3P05106 788 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 HOXB2P14652 356 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 NDUFV2P19404 249 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 MAOBP27338 520 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms