RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ADAM9Q13443 819 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 TAF12Q16514 161 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 ZPBP2Q6X784 338 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 IRF2BP1Q8IU81 584 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 CREBRFQ8IUR6 639 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 ZC3H3Q8IXZ2 948 aaKnown RBP21.92■■□□□ 1.1
PSEN1-225ENST00000560005 SYCP3Q8IZU3 236 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 TMEM161BQ8NDZ6 487 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 GLIS3Q8NEA6 775 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 GIPC2Q8TF65 315 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 GATA6Q92908 595 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 USP13Q92995 863 aaPredicted RBP21.92■■□□□ 1.1
PSEN1-225ENST00000560005 SENP8Q96LD8 212 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 SCNM1Q9BWG6 230 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 RTN4Q9NQC3 1192 aaKnown RBP21.92■■□□□ 1.1
PSEN1-225ENST00000560005 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.92■■□□□ 1.1
PSEN1-225ENST00000560005 PPP1R37O75864 691 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 CASP5P51878 434 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 LILRA4P59901 499 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 BFSP1Q12934 665 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 DMC1Q14565 340 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 HSP90AA4PQ58FG1 418 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 SYT13Q7L8C5 426 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 VSTM4Q8IW00 320 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 MAB21L3Q8N8X9 362 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 SPC24Q8NBT2 197 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 RIN3Q8TB24 985 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 TMEM174Q8WUU8 243 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 CNOT6LQ96LI5 555 aaKnown RBP21.91■■□□□ 1.1
PSEN1-225ENST00000560005 NAP1L5Q96NT1 182 aaPredicted RBP21.91■■□□□ 1.1
PSEN1-225ENST00000560005 P2RY13Q9BPV8 354 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 TMEM9BQ9NQ34 198 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 EBF1Q9UH73 591 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 INVSQ9Y283 1065 aa21.91■■□□□ 1.1
PSEN1-225ENST00000560005 NUP205Q92621 2012 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 TSC2P49815 1807 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 LACTBL1A8MY62 500 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 KHNYNO15037 678 aaKnown RBP21.9■■□□□ 1.1
PSEN1-225ENST00000560005 XPOTO43592 962 aaKnown RBP21.9■■□□□ 1.1
PSEN1-225ENST00000560005 CEACAM1P13688 526 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 MARSP56192 900 aaKnown RBP21.9■■□□□ 1.1
PSEN1-225ENST00000560005 FBXO43Q4G163 708 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 CC2D1AQ6P1N0 951 aaPredicted RBP21.9■■□□□ 1.1
PSEN1-225ENST00000560005 ABCA7Q8IZY2 2146 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 TUBGCP2Q9BSJ2 902 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 FGFBP2Q9BYJ0 223 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 ZCWPW1Q9H0M4 648 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 METTL14Q9HCE5 456 aaKnown RBP21.9■■□□□ 1.1
PSEN1-225ENST00000560005 ZMYM5Q9UJ78 669 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 NBEAQ8NFP9 2946 aa21.9■■□□□ 1.1
PSEN1-225ENST00000560005 SLC16A3O15427 465 aaKnown RBP21.89■■□□□ 1.09
PSEN1-225ENST00000560005 NRDCO43847 1150 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 CSRP1P21291 193 aaKnown RBP21.89■■□□□ 1.09
PSEN1-225ENST00000560005 GJA4P35212 333 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 DGKEP52429 567 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 MAN2A1Q16706 1144 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 CCDC40Q4G0X9 1142 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 FKBP15Q5T1M5 1219 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 APTXQ7Z2E3 356 aaKnown RBP21.89■■□□□ 1.09
PSEN1-225ENST00000560005 TMEM150AQ86TG1 271 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 SLC9A9Q8IVB4 645 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 ZCCHC14Q8WYQ9 949 aaKnown RBP21.89■■□□□ 1.09
PSEN1-225ENST00000560005 EZH1Q92800 747 aaPredicted RBP21.89■■□□□ 1.09
PSEN1-225ENST00000560005 TDP1Q9NUW8 608 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 TBX20Q9UMR3 447 aa21.89■■□□□ 1.09
PSEN1-225ENST00000560005 ZNF638Q14966 1978 aaKnown RBP21.88■■□□□ 1.09
PSEN1-225ENST00000560005 ANK1P16157 1881 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 PATE3B3GLJ2 98 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 CDX4O14627 284 aaPredicted RBP21.88■■□□□ 1.09
PSEN1-225ENST00000560005 NR3C1P04150 777 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 TPM1P09493 284 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 NR2F2P24468 414 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 HOXD13P35453 343 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 ENOX2Q16206 610 aaKnown RBP21.88■■□□□ 1.09
PSEN1-225ENST00000560005 ZC2HC1CQ53FD0 456 aaPredicted RBP21.88■■□□□ 1.09
PSEN1-225ENST00000560005 PMS2CLQ68D20 193 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 SPECC1LQ69YQ0 1117 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 KIAA1211LQ6NV74 962 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 TMC6Q7Z403 805 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 ACDQ96AP0 544 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 IQCDQ96DY2 449 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 BICD1Q96G01 975 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 KIF9Q9HAQ2 790 aa21.88■■□□□ 1.09
PSEN1-225ENST00000560005 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.88■■□□□ 1.09
PSEN1-225ENST00000560005 DENND4CQ5VZ89 1909 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 A0A1W2PQC6 194 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 LGALS16A8MUM7 142 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 EPB41P11171 864 aaKnown RBP21.87■■□□□ 1.09
PSEN1-225ENST00000560005 RING1Q06587 406 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 TRIM14Q14142 442 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 PDGFRLQ15198 375 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 UAP1L1Q3KQV9 507 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 TXNDC8Q6A555 127 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 C12orf56Q8IXR9 622 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 CCDC150Q8NCX0 1101 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 DEFB124Q8NES8 71 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 EXOC4Q96A65 974 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 TPSD1Q9BZJ3 242 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 VPS16Q9H269 839 aa21.87■■□□□ 1.09
PSEN1-225ENST00000560005 TAB2Q9NYJ8 693 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms