RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 XKR4Q5GH76 650 aa18.7■□□□□ 0.58
SNX1-208ENST00000559844 DAB2IPQ5VWQ8 1189 aa18.7■□□□□ 0.58
SNX1-208ENST00000559844 XYLT1Q86Y38 959 aa18.7■□□□□ 0.58
SNX1-208ENST00000559844 UBLCP1Q8WVY7 318 aaPredicted RBP18.7■□□□□ 0.58
SNX1-208ENST00000559844 MIOSQ9NXC5 875 aa18.7■□□□□ 0.58
SNX1-208ENST00000559844 CYTH4Q9UIA0 394 aa18.7■□□□□ 0.58
SNX1-208ENST00000559844 TBKBP1A7MCY6 615 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 GOLGA8SH3BPF8 625 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 PPFIA2O75334 1257 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 GJB5O95377 273 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 GAS8O95995 478 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 KRT1P04264 644 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 KCNE1P15382 129 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 RPL21P46778 160 aaKnown RBP18.69■□□□□ 0.58
SNX1-208ENST00000559844 OGDHQ02218 1023 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 DHX9Q08211 1270 aaKnown RBP18.69■□□□□ 0.58
SNX1-208ENST00000559844 PAN2Q504Q3 1202 aaKnown RBP18.69■□□□□ 0.58
SNX1-208ENST00000559844 NOMO2Q5JPE7 1267 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 ZFYVE27Q5T4F4 411 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 LCLAT1Q6UWP7 414 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 POLNQ7Z5Q5 900 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 HERC6Q8IVU3 1022 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 PHOSPHO2Q8TCD6 241 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 URGCPQ8TCY9 931 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 CASD1Q96PB1 797 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 CPXM1Q96SM3 734 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 ZBED2Q9BTP6 218 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 GRHL1Q9NZI5 618 aa18.69■□□□□ 0.58
SNX1-208ENST00000559844 GOLGA6L10A6NI86 522 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 F8VP50 259 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 INPPL1O15357 1258 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 PSMA2P25787 234 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 PTPN7P35236 360 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 FLT3P36888 993 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 GPD2P43304 727 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 KCNJ1P48048 391 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 PLTPP55058 493 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 PDCLQ13371 301 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 ACAP1Q15027 740 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 ZDHHC24Q6UX98 284 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 ATL2Q8NHH9 583 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 YME1L1Q96TA2 773 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 DNAI2Q9GZS0 605 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 TUBGCP4Q9UGJ1 667 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 SNX9Q9Y5X1 595 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 ERBB2P04626 1255 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 THP07101 528 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 KRT17Q04695 432 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 CALCOCO2Q13137 446 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 PTK6Q13882 451 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 UAP1Q16222 522 aaPredicted RBP18.68■□□□□ 0.58
SNX1-208ENST00000559844 HADHQ16836 314 aaKnown RBP18.68■□□□□ 0.58
SNX1-208ENST00000559844 UNC93AQ86WB7 457 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 MCRS1Q96EZ8 462 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 ZNF560Q96MR9 790 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 SLITRK1Q96PX8 696 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 TXLNGYQ9BZA5 131 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 CHST7Q9NS84 486 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 TBC1D13Q9NVG8 400 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 WHRNQ9P202 907 aa18.68■□□□□ 0.58
SNX1-208ENST00000559844 TJP3O95049 919 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 BMP8BP34820 402 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 RFC1P35251 1148 aaPredicted RBP18.67■□□□□ 0.58
SNX1-208ENST00000559844 PNPLA4P41247 253 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 LMAN1P49257 510 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 RNASELQ05823 741 aaKnown RBP18.67■□□□□ 0.58
SNX1-208ENST00000559844 GRIK3Q13003 919 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 SNX1Q13596 522 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 C9orf57Q5W0N0 161 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 CHRDL2Q6WN34 429 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 ART4Q93070 314 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 RNF25Q96BH1 459 aaPredicted RBP18.67■□□□□ 0.58
SNX1-208ENST00000559844 PPP1R10Q96QC0 940 aaKnown RBP18.67■□□□□ 0.58
SNX1-208ENST00000559844 HERPUD2Q9BSE4 406 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 HEMGNQ9BXL5 484 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 MRPL9Q9BYD2 267 aaKnown RBP18.67■□□□□ 0.58
SNX1-208ENST00000559844 RC3H2Q9HBD1 1191 aaKnown RBP18.67■□□□□ 0.58
SNX1-208ENST00000559844 METTL5Q9NRN9 209 aaKnown RBP18.67■□□□□ 0.58
SNX1-208ENST00000559844 KANSL3Q9P2N6 904 aa18.67■□□□□ 0.58
SNX1-208ENST00000559844 KRT14P02533 472 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 KRT7P08729 469 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 SETSIPP0DME0 302 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 CYP3A5P20815 502 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 LMNB2Q03252 620 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 LLGL1Q15334 1064 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 TTMPQ5BVD1 217 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 CEP85LQ5SZL2 805 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 FBXO25Q8TCJ0 367 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 C18orf25Q96B23 403 aaPredicted RBP18.66■□□□□ 0.58
SNX1-208ENST00000559844 ZNF689Q96CS4 500 aaPredicted RBP18.66■□□□□ 0.58
SNX1-208ENST00000559844 SLC38A7Q9NVC3 462 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 TSPAN16Q9UKR8 245 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 KIAA1671Q9BY89 1806 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 ITIH2P19823 946 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 PMS2P54278 862 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 EIF3BP55884 814 aaKnown RBP18.66■□□□□ 0.58
SNX1-208ENST00000559844 SNX16P57768 344 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 SLMAPQ14BN4 828 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 FAM109BQ6ICB4 259 aaPredicted RBP18.66■□□□□ 0.58
SNX1-208ENST00000559844 SPOCD1Q6ZMY3 1216 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms