RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CHSY1Q86X52 802 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 SPARTQ8N0X7 666 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 GALNT4Q8N4A0 578 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 TERB1Q8NA31 727 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 TSR2Q969E8 191 aaKnown RBP4.56□□□□□ -1.68
SPG11-218ENST00000559754 PPP2R3CQ969Q6 453 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 NT5C1BQ96P26 610 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 SNX18Q96RF0 628 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 PPP1R9BQ96SB3 815 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 THAP7Q9BT49 309 aaPredicted RBP4.56□□□□□ -1.68
SPG11-218ENST00000559754 B3GNT5Q9BYG0 378 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 TMEM60Q9H2L4 133 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 A1CFQ9NQ94 594 aaKnown RBP4.56□□□□□ -1.68
SPG11-218ENST00000559754 ANLNQ9NQW6 1124 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 BTBD3Q9Y2F9 522 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 FAM227AF5H4B4 570 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 M0R3H8 397 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 ADAMTS3O15072 1205 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 CREB3O43889 395 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 PLIN1O60240 522 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 EXOC3O60645 756 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 USP1O94782 785 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 SLC7A1P30825 629 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 PRKAR1BP31321 381 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 SUMO2P61956 95 aaKnown RBP4.55□□□□□ -1.68
SPG11-218ENST00000559754 CCNIQ14094 377 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 PPP2R5AQ15172 486 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 ZIK1Q3SY52 487 aaPredicted RBP4.55□□□□□ -1.68
SPG11-218ENST00000559754 MAP9Q49MG5 647 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 MINDY4Q4G0A6 757 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 C4orf46Q504U0 113 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 CEP78Q5JTW2 689 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 TMEM63BQ5T3F8 832 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 DENND2CQ68D51 928 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 SLC9A4Q6AI14 798 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 SERPINA13PQ6UXR4 307 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 OVCH2Q7RTZ1 564 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 WDR75Q8IWA0 830 aaKnown RBP4.55□□□□□ -1.68
SPG11-218ENST00000559754 RAVER1Q8IY67 606 aaKnown RBP4.55□□□□□ -1.68
SPG11-218ENST00000559754 GALNT16Q8N428 558 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 SIRT6Q8N6T7 355 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 IL31RAQ8NI17 732 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 DENND1AQ8TEH3 1009 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 RAPGEF4Q8WZA2 1011 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 NAF1Q96HR8 494 aaKnown RBP4.55□□□□□ -1.68
SPG11-218ENST00000559754 MACROD1Q9BQ69 325 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 SMURF2Q9HAU4 748 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 XPNPEP3Q9NQH7 507 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 AMFRQ9UKV5 643 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 SNX14Q9Y5W7 946 aa4.55□□□□□ -1.68
SPG11-218ENST00000559754 ISM1B1AKI9 464 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 PHKG2P15735 406 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 E2F1Q01094 437 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 OS9Q13438 667 aaPredicted RBP4.54□□□□□ -1.68
SPG11-218ENST00000559754 HDAC1Q13547 482 aaPredicted RBP4.54□□□□□ -1.68
SPG11-218ENST00000559754 C11orf87Q6NUJ2 197 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 MIS18BP1Q6P0N0 1132 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 TICAM2Q86XR7 235 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 SFTPA1Q8IWL2 248 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 CHPFQ8IZ52 775 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 C8orf58Q8NAV2 365 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 SPSB4Q96A44 273 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 RUNDC1Q96C34 613 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 RITA1Q96K30 269 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 LENG8Q96PV6 779 aaPredicted RBP4.54□□□□□ -1.68
SPG11-218ENST00000559754 FYTTD1Q96QD9 318 aaKnown RBP4.54□□□□□ -1.68
SPG11-218ENST00000559754 QTRT1Q9BXR0 403 aaKnown RBP4.54□□□□□ -1.68
SPG11-218ENST00000559754 CIPCQ9C0C6 399 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 UBA5Q9GZZ9 404 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 FAM204AQ9H8W3 233 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 ATP6V0A4Q9HBG4 840 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 C1orf112Q9NSG2 853 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 USP22Q9UPT9 525 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 TBC1D30Q9Y2I9 924 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 COMMD10Q9Y6G5 202 aa4.54□□□□□ -1.68
SPG11-218ENST00000559754 CYP2D7A0A087X1C5 515 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 MBD3L4A6NDZ8 208 aaPredicted RBP4.53□□□□□ -1.68
SPG11-218ENST00000559754 MBD3L3A6NE82 208 aaPredicted RBP4.53□□□□□ -1.68
SPG11-218ENST00000559754 BTBD19C9JJ37 291 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 AP4M1O00189 453 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 CCP110O43303 1012 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 FRS3O43559 492 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 PDE8BO95263 885 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 KRT18P05783 430 aaKnown RBP4.53□□□□□ -1.68
SPG11-218ENST00000559754 EPHA3P29320 983 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 GKP32189 559 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 MMP13P45452 471 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 MTHFSP49914 203 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 RENBPP51606 427 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 CACNB3P54284 484 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 BCAT1P54687 386 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 MLC1Q15049 377 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 CYP1B1Q16678 543 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 LY6KQ17RY6 165 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 SUPT20HL1Q3ZLR7 823 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 DCAF12L1Q5VU92 463 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 FCRL6Q6DN72 434 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 KIAA0319LQ8IZA0 1049 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 ADAMTS18Q8TE60 1221 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 TMEM171Q8WVE6 324 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms