RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SYCE1Q8N0S2 351 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 ARFGAP1Q8N6T3 406 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 MSANTD4Q8NCY6 345 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 TMEM169Q96HH4 297 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 MS4A14Q96JA4 679 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 LBHD1Q9BQE6 289 aaPredicted RBP18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 DNAI2Q9GZS0 605 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 AMFRQ9UKV5 643 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 SPOPO43791 374 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 SOD2P04179 222 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 CPB1P15086 417 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 TFE3P19532 575 aaPredicted RBP18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 TKTL1P51854 596 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 SLC6A3Q01959 620 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 RPS6KA1Q15418 735 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 PSMD5Q16401 504 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 USP41Q3LFD5 358 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 TXNRD3NBQ6F5E7 133 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 HFE2Q6ZVN8 426 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 FIBCD1Q8N539 461 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 SCAMP5Q8TAC9 235 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 HSFY1Q96LI6 401 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 SPG21Q9NZD8 308 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 WDR35Q9P2L0 1181 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 CDC23Q9UJX2 597 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 WDR27A2RRH5 827 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 MTMR11A4FU01 709 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 KCNK3O14649 394 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 TLL1O43897 1013 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 ZNF211Q13398 564 aaPredicted RBP18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 C15orf59Q2T9L4 293 aaPredicted RBP18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 BHLHA9Q7RTU4 235 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 SP7Q8TDD2 431 aaPredicted RBP18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 GPR152Q8TDT2 470 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 KCTD13Q8WZ19 329 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 CFAP57Q96MR6 1250 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 SLC9A7Q96T83 725 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 CARD6Q9BX69 1037 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 ULBP1Q9BZM6 244 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 DMAP1Q9NPF5 467 aaPredicted RBP18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 MTRRQ9UBK8 725 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 SLC27A5Q9Y2P5 690 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 INSL6Q9Y581 213 aa18.21■□□□□ 0.51
CHRNA3-206ENST00000559658 OR6C75A6NL08 312 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 C2CD4BA6NLJ0 364 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 MAPRE1Q15691 268 aaKnown RBP18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 DDR2Q16832 855 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 RAB41Q5JT25 222 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 ANKS3Q6ZW76 656 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 CREG2Q8IUH2 290 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 DCP1BQ8IZD4 617 aaKnown RBP18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 FBXO22Q8NEZ5 403 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 PIK3R5Q8WYR1 880 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 ACSF2Q96CM8 615 aaPredicted RBP18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 CLSTN3Q9BQT9 956 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 KLHL11Q9NVR0 708 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 FGF18O76093 207 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 USP17L7P0C7H9 530 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 PSMA2P25787 234 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 GJC1P36383 396 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 PGFP49763 221 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 SLC8A3P57103 927 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 PITX1P78337 314 aaPredicted RBP18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 ROR1Q01973 937 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 IFRD2Q12894 506 aaPredicted RBP18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 SHHQ15465 462 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 CFAP221Q4G0U5 840 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 C4orf50Q6ZRC1 276 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 SCN4BQ8IWT1 228 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 VPS52Q8N1B4 723 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 KLHL23Q8NBE8 558 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 RXFP2Q8WXD0 754 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 CLP1Q92989 425 aaKnown RBP18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 RAD9AQ99638 391 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 HERC2P3Q9BVR0 1158 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 LRRC4Q9HBW1 653 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 CALCOCO1Q9P1Z2 691 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 GREB1Q4ZG55 1949 aa18.2■□□□□ 0.5
CHRNA3-206ENST00000559658 OR1D2P34982 312 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 CTNNA1P35221 906 aaKnown RBP18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 GRIK1P39086 918 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 GLUD2P49448 558 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 PEX5P50542 639 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 DSG1Q02413 1049 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 ATP13A4Q4VNC1 1196 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 SLC26A9Q7LBE3 791 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 DDX53Q86TM3 631 aaKnown RBP18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 SIX6OS1Q8N1H7 587 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 CYLDQ9NQC7 956 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 IP6K2Q9UHH9 426 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
CHRNA3-206ENST00000559658 COL4A4P53420 1690 aaPredicted RBP18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 YJEFN3A6XGL0 299 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 E7ENQ6 273 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 TNFRSF10BO14763 440 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 LRCH4O75427 683 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 ACADSBP45954 432 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 SLC5A3P53794 718 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 MRPS5P82675 430 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms