RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 LSM14BQ9BX40 385 aaKnown RBP19.79■□□□□ 0.76
CASC4-209ENST00000559222 DUSP16Q9BY84 665 aa19.79■□□□□ 0.76
CASC4-209ENST00000559222 FAM124BQ9H5Z6 455 aaPredicted RBP19.79■□□□□ 0.76
CASC4-209ENST00000559222 TRPV4Q9HBA0 871 aa19.79■□□□□ 0.76
CASC4-209ENST00000559222 ZFP14Q9HCL3 533 aa19.79■□□□□ 0.76
CASC4-209ENST00000559222 IL37Q9NZH6 218 aa19.79■□□□□ 0.76
CASC4-209ENST00000559222 GMIPQ9P107 970 aa19.79■□□□□ 0.76
CASC4-209ENST00000559222 UXTQ9UBK9 157 aaPredicted RBP19.79■□□□□ 0.76
CASC4-209ENST00000559222 TMEM221A6NGB7 291 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 M0R296 226 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 KRT5P13647 590 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 PTMSP20962 102 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 YWHAQP27348 245 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 SIGLEC14Q08ET2 396 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 IQCB1Q15051 598 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 SGO2Q562F6 1265 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 MON1AQ86VX9 555 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 CMTM8Q8IZV2 173 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 ARL14EPQ8N8R7 260 aaPredicted RBP19.78■□□□□ 0.76
CASC4-209ENST00000559222 UBA3Q8TBC4 463 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 MRPS31Q92665 395 aaKnown RBP19.78■□□□□ 0.76
CASC4-209ENST00000559222 FBXO32Q969P5 355 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 NXPE3Q969Y0 559 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 CEP295NLQ96MC4 621 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 BPIFA3Q9BQP9 254 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 LIMA1Q9UHB6 759 aaKnown RBP19.78■□□□□ 0.76
CASC4-209ENST00000559222 CNTN6Q9UQ52 1028 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 FHOD1Q9Y613 1164 aa19.78■□□□□ 0.76
CASC4-209ENST00000559222 KMT2EQ8IZD2 1858 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 ZNF840PA6NDX5 716 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 EPHB6O15197 1021 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 CYP26A1O43174 497 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 PAEPP09466 180 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 VDRP11473 427 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 SRFP11831 508 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 ZNF165P49910 485 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 PDE4CQ08493 712 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 UBALD2Q8IYN6 164 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 USP13Q92995 863 aaPredicted RBP19.77■□□□□ 0.76
CASC4-209ENST00000559222 GPR88Q9GZN0 384 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 CHORDC1Q9UHD1 332 aaPredicted RBP19.77■□□□□ 0.76
CASC4-209ENST00000559222 DNAJC12Q9UKB3 198 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 CA14Q9ULX7 337 aa19.77■□□□□ 0.76
CASC4-209ENST00000559222 FAM92AA1XBS5 289 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 KRBA1A5PL33 1030 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 GABBR2O75899 941 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 RTN3O95197 1032 aaPredicted RBP19.76■□□□□ 0.75
CASC4-209ENST00000559222 ABL1P00519 1130 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 ZXDBP98169 803 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 PKDCCQ504Y2 493 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 HFE2Q6ZVN8 426 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 PIGZQ86VD9 579 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 ANKRD52Q8NB46 1076 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 SHC3Q92529 594 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 ZFYVE19Q96K21 471 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 RNF38Q9H0F5 515 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 GANQ9H2C0 597 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 CBX8Q9HC52 389 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 OSER1Q9NX31 292 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 TRPM5Q9NZQ8 1165 aa19.76■□□□□ 0.75
CASC4-209ENST00000559222 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.76■□□□□ 0.75
CASC4-209ENST00000559222 LETM1O95202 739 aaPredicted RBP19.75■□□□□ 0.75
CASC4-209ENST00000559222 TRIM21P19474 475 aaKnown RBP19.75■□□□□ 0.75
CASC4-209ENST00000559222 MFAP3P55082 362 aa19.75■□□□□ 0.75
CASC4-209ENST00000559222 KLHDC7AQ5VTJ3 777 aa19.75■□□□□ 0.75
CASC4-209ENST00000559222 LUZP1Q86V48 1076 aa19.75■□□□□ 0.75
CASC4-209ENST00000559222 NDRG1Q92597 394 aaKnown RBP19.75■□□□□ 0.75
CASC4-209ENST00000559222 LRFN3Q9BTN0 628 aa19.75■□□□□ 0.75
CASC4-209ENST00000559222 CCSER2Q9H7U1 834 aa19.75■□□□□ 0.75
CASC4-209ENST00000559222 NMUR1Q9HB89 426 aa19.75■□□□□ 0.75
CASC4-209ENST00000559222 SLC2A4RGQ9NR83 387 aa19.75■□□□□ 0.75
CASC4-209ENST00000559222 SIK3Q9Y2K2 1263 aa19.75■□□□□ 0.75
CASC4-209ENST00000559222 LGALS16A8MUM7 142 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 M0QYV0 167 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 OAS1P00973 400 aaKnown RBP19.74■□□□□ 0.75
CASC4-209ENST00000559222 ZDHHC11BP0C7U3 371 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 DDX6P26196 483 aaKnown RBP eCLIP19.74■□□□□ 0.75
CASC4-209ENST00000559222 GDI1P31150 447 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 USP8P40818 1118 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 KIF11P52732 1056 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 BCAT1P54687 386 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 SKOR2Q2VWA4 1001 aaPredicted RBP19.74■□□□□ 0.75
CASC4-209ENST00000559222 DENND1BQ6P3S1 775 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 LCLAT1Q6UWP7 414 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 MFSD6LQ8IWD5 586 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 SIX5Q8N196 739 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 TTC16Q8NEE8 873 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 SECISBP2LQ93073 1101 aaKnown RBP19.74■□□□□ 0.75
CASC4-209ENST00000559222 SLITRK1Q96PX8 696 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 NAA15Q9BXJ9 866 aaKnown RBP19.74■□□□□ 0.75
CASC4-209ENST00000559222 NAT10Q9H0A0 1025 aaKnown RBP19.74■□□□□ 0.75
CASC4-209ENST00000559222 RAPGEFL1Q9UHV5 662 aa19.74■□□□□ 0.75
CASC4-209ENST00000559222 TRAV19A0A0A6YYK7 116 aa19.73■□□□□ 0.75
CASC4-209ENST00000559222 A0A1W2PQH9 124 aa19.73■□□□□ 0.75
CASC4-209ENST00000559222 ARNTLO00327 626 aa19.73■□□□□ 0.75
CASC4-209ENST00000559222 FOXN3O00409 490 aaPredicted RBP19.73■□□□□ 0.75
CASC4-209ENST00000559222 PIK3R2O00459 728 aa19.73■□□□□ 0.75
CASC4-209ENST00000559222 SCAMP3O14828 347 aaKnown RBP19.73■□□□□ 0.75
CASC4-209ENST00000559222 GPR37L1O60883 481 aa19.73■□□□□ 0.75
CASC4-209ENST00000559222 CKMP06732 381 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms