RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 DENND5BQ6ZUT9 1274 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 OTOP3Q7RTS5 596 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 ITIH5Q86UX2 942 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 PIGZQ86VD9 579 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 SLC47A2Q86VL8 602 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 ANKRD52Q8NB46 1076 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 LEMD2Q8NC56 503 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 RNF214Q8ND24 703 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 UBA3Q8TBC4 463 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
SNX1-204ENST00000559061 BAP1Q92560 729 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 CEP295NLQ96MC4 621 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 ASB16Q96NS5 453 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 SLC46A2Q9BY10 475 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 OSER1Q9NX31 292 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNX1-204ENST00000559061 LIMD1Q9UGP4 676 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 MUTYHQ9UIF7 546 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 USP3Q9Y6I4 520 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 BDP1A6H8Y1 2624 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 ZNF840PA6NDX5 716 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 KRT5P13647 590 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 CD19P15391 556 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 CDK11BP21127 795 aaKnown RBP12.09□□□□□ -0.47
SNX1-204ENST00000559061 RPL34P49207 117 aaKnown RBP12.09□□□□□ -0.47
SNX1-204ENST00000559061 KIF11P52732 1056 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 POLR2FP61218 127 aaKnown RBP12.09□□□□□ -0.47
SNX1-204ENST00000559061 TAF10Q12962 218 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 CNGA2Q16280 664 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 IER5LQ5T953 404 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 TXNDC8Q6A555 127 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 TANGO2Q6ICL3 276 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 SCD5Q86SK9 330 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 NUP93Q8N1F7 819 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 WDTC1Q8N5D0 677 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 SLC35F5Q8WV83 523 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 NDRG1Q92597 394 aaKnown RBP12.09□□□□□ -0.47
SNX1-204ENST00000559061 SECISBP2LQ93073 1101 aaKnown RBP12.09□□□□□ -0.47
SNX1-204ENST00000559061 STK33Q9BYT3 514 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 SMG9Q9H0W8 520 aaKnown RBP12.09□□□□□ -0.47
SNX1-204ENST00000559061 RBSNQ9H1K0 784 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 KCNK12Q9HB15 430 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 NMUR1Q9HB89 426 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 PNPLA8Q9NP80 782 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 GMIPQ9P107 970 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 TJP2Q9UDY2 1190 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 CCL26Q9Y258 94 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 NR2E1Q9Y466 385 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 NUMBLQ9Y6R0 609 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 ATP8B3O60423 1300 aa12.09□□□□□ -0.47
SNX1-204ENST00000559061 TECTAO75443 2155 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 TICRRQ7Z2Z1 1910 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 ZNF197O14709 1029 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 XPO1O14980 1071 aaKnown RBP12.08□□□□□ -0.48
SNX1-204ENST00000559061 NARSO43776 548 aaKnown RBP12.08□□□□□ -0.48
SNX1-204ENST00000559061 ABCB7O75027 752 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 OLFM2O95897 454 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 OAS1P00973 400 aaKnown RBP12.08□□□□□ -0.48
SNX1-204ENST00000559061 CHRNB2P17787 502 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 ANXA13P27216 316 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 GNA15P30679 374 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 VIPR2P41587 438 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 GPD2P43304 727 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 PLA2G4AP47712 749 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 BCAT1P54687 386 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 IFRD2Q12894 506 aaPredicted RBP12.08□□□□□ -0.48
SNX1-204ENST00000559061 RAPGEF1Q13905 1077 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 FKBP15Q5T1M5 1219 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 GPR158Q5T848 1215 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 CYP4A22Q5TCH4 519 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 PMF1Q6P1K2 205 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 NOP9Q86U38 636 aaKnown RBP12.08□□□□□ -0.48
SNX1-204ENST00000559061 ZSCAN18Q8TBC5 510 aaPredicted RBP12.08□□□□□ -0.48
SNX1-204ENST00000559061 KXD1Q9BQD3 176 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 RNF38Q9H0F5 515 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 ATXN3LQ9H3M9 355 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 TRPV4Q9HBA0 871 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 NLRC4Q9NPP4 1024 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 GDE1Q9NZC3 331 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 NOCTQ9UK39 431 aaKnown RBP12.08□□□□□ -0.48
SNX1-204ENST00000559061 KIAA1257Q9ULG3 409 aa12.08□□□□□ -0.48
SNX1-204ENST00000559061 A0A1W2PQC6 194 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 M0QYV0 167 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 RFX1P22670 979 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 YWHAQP27348 245 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 CDC25CP30307 473 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 BST2Q10589 180 aaKnown RBP12.07□□□□□ -0.48
SNX1-204ENST00000559061 SNX30Q5VWJ9 437 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 VITQ6UXI7 678 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 MON1AQ86VX9 555 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 CLEC4CQ8WTT0 213 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 SLC20A1Q8WUM9 679 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 USP13Q92995 863 aaPredicted RBP12.07□□□□□ -0.48
SNX1-204ENST00000559061 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
SNX1-204ENST00000559061 FAM81BQ96LP2 452 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 CYP2S1Q96SQ9 504 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 SYT11Q9BT88 431 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms