RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 TMPRSS6Q8IU80 811 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 VRK3Q8IV63 474 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 YAF2Q8IY57 180 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 FAM9AQ8IZU1 332 aaPredicted RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 CLASRPQ8N2M8 674 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.93□□□□□ -2.1
USP3-209ENST00000558925 PAF1Q8N7H5 531 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 Q8NA96 180 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CCDC150Q8NCX0 1101 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 DNAJB14Q8TBM8 379 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CPT1CQ8TCG5 803 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 BPIFB1Q8TDL5 484 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 PNISRQ8TF01 805 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 NUP133Q8WUM0 1156 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 TMEM125Q96AQ2 219 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 LTV1Q96GA3 475 aaPredicted RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 ZBTB45Q96K62 511 aaPredicted RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 UBXN10Q96LJ8 280 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 MED15Q96RN5 788 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 PRPF18Q99633 342 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 NAP1L4Q99733 375 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 FAM167BQ9BTA0 163 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 KATNAL1Q9BW62 490 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 SLC46A2Q9BY10 475 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 KRTAP1-5Q9BYS1 174 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 UBA5Q9GZZ9 404 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 NELFAQ9H3P2 528 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 ZNF768Q9H5H4 540 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 SYNPO2LQ9H987 977 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 FSCN3Q9NQT6 498 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 TM7SF3Q9NS93 570 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 FAM30AQ9NZY2 134 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 DKK4Q9UBT3 224 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 LPAR3Q9UBY5 353 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 SRP68Q9UHB9 627 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 HPSEQ9Y251 543 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 MAP3K2Q9Y2U5 619 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 USP15Q9Y4E8 981 aaPredicted RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 HS3ST4Q9Y661 456 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CDY1Q9Y6F8 540 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 A0A1B0GTW7 788 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 CCDC195A0A1B0GUA6 201 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 KRTAP23-1A1A580 65 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 GRXCR1A8MXD5 290 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 AHRRA9YTQ3 701 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 ADM5C9JUS6 153 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 PROB1E7EW31 1015 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 J3KTA2 159 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 HNRNPDLO14979 420 aaKnown RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 DNPH1O43598 174 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 RGS10O43665 173 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 MFAP3LO75121 409 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 RPS6KA4O75676 772 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 IPO13O94829 963 aaKnown RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 RHOBTB3O94955 611 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 CSF1RP07333 972 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 PDHA1P08559 390 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 ATXN1LP0C7T5 689 aaKnown RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 NPPBP16860 134 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 KCNA3P22001 575 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 ZFP36P26651 326 aaKnown RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 AKT1P31749 480 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 RPS19P39019 145 aaKnown RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 CCT5P48643 541 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 PXNP49023 591 aaPredicted RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 CLK3P49761 638 aaKnown RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 SEC24CP53992 1094 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 PRKAG1P54619 331 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 WNT3P56703 355 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 LOXL3P58215 753 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 PIGFQ07326 219 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 ZNF844Q08AG5 666 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 FOXO1Q12778 655 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 MYO1EQ12965 1108 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 SIM2Q14190 667 aaPredicted RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 GRM4Q14833 912 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 MAPKAPK3Q16644 382 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 GEN1Q17RS7 908 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 LY6KQ17RY6 165 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 SLC5A9Q2M3M2 681 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 BTBD16Q32M84 506 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 ZNF750Q32MQ0 723 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 AMOTQ4VCS5 1084 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 DCAF17Q5H9S7 520 aaPredicted RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 ARHGAP40Q5TG30 622 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 FAXCQ5TGI0 409 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 RGS7BPQ6MZT1 257 aaPredicted RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 CCDC70Q6NSX1 233 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 DRICH1Q6PGQ1 229 aaPredicted RBP1.92□□□□□ -2.1
USP3-209ENST00000558925 SYCE2Q6PIF2 218 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 MMS22LQ6ZRQ5 1243 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 RRAGAQ7L523 313 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 TMPRSS9Q7Z410 1059 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 MRGPREQ86SM8 312 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 SGMS1Q86VZ5 419 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 HEATR4Q86WZ0 1026 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 ADGRG3Q86Y34 549 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 RHOT2Q8IXI1 618 aa1.92□□□□□ -2.1
USP3-209ENST00000558925 ADGRG5Q8IZF4 528 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 304.4 ms