RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 FBRSL1Q9HCM7 1045 aaKnown RBP13.29□□□□□ -0.28
SMAD3-208ENST00000558827 TMEM8AQ9HCN3 771 aa13.29□□□□□ -0.28
SMAD3-208ENST00000558827 USP34Q70CQ2 3546 aa13.29□□□□□ -0.28
SMAD3-208ENST00000558827 SDK1Q7Z5N4 2213 aa13.29□□□□□ -0.28
SMAD3-208ENST00000558827 MYO15AQ9UKN7 3530 aa13.29□□□□□ -0.28
SMAD3-208ENST00000558827 MYOFQ9NZM1 2061 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 PATJQ8NI35 1801 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 LEFTY2O00292 366 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 MAPK13O15264 365 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 MBL2P11226 248 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-208ENST00000558827 RPS9P46781 194 aaKnown RBP13.28□□□□□ -0.28
SMAD3-208ENST00000558827 PGFP49763 221 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 DMWDQ09019 674 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 ZNF77Q15935 545 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 LPAL2Q16609 132 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 EDRF1Q3B7T1 1238 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 KRT39Q6A163 491 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 HEATR6Q6AI08 1181 aaKnown RBP13.28□□□□□ -0.28
SMAD3-208ENST00000558827 PKN3Q6P5Z2 889 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 RALGPS2Q86X27 583 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-208ENST00000558827 DCLK2Q8N568 766 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 TAF4BQ92750 862 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 TIGD1Q96MW7 591 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 ARID3AQ99856 593 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 TTLL2Q9BWV7 592 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 IMPG2Q9BZV3 1241 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 GMIPQ9P107 970 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 CPQQ9Y646 472 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 ATP8B3O60423 1300 aa13.28□□□□□ -0.28
SMAD3-208ENST00000558827 ANTXRLA6NF34 631 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 EGFP01133 1207 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 BMP6P22004 513 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 MXI1P50539 228 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 GALK1P51570 392 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 SLC5A3P53794 718 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CAMK4Q16566 473 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CBWD6Q4V339 395 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CBWD3Q5JTY5 395 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CBWD5Q5RIA9 395 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 FSTL4Q6MZW2 842 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 GPRIN1Q7Z2K8 1008 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CRYBG2Q8N1P7 616 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 WHAMMQ8TF30 809 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CYFIP2Q96F07 1278 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 SMARCD1Q96GM5 515 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 SLITRK1Q96PX8 696 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 HINFPQ9BQA5 517 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 NIF3L1Q9GZT8 377 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CCSER2Q9H7U1 834 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 ECT2Q9H8V3 914 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 KIF9Q9HAQ2 790 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 DMAP1Q9NPF5 467 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CFAP97Q9P2B7 532 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 HOOK1Q9UJC3 728 aaKnown RBP13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CTNND2Q9UQB3 1225 aa13.27□□□□□ -0.29
SMAD3-208ENST00000558827 CHURC1-FNTBB4DL54 471 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 TNFRSF10BO14763 440 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 LMNAP02545 664 aaKnown RBP13.26□□□□□ -0.29
SMAD3-208ENST00000558827 IRF1P10914 325 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 GJA4P35212 333 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 CXCL12P48061 93 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 PXNP49023 591 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-208ENST00000558827 FNTBP49356 437 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 FKBP3Q00688 224 aaKnown RBP13.26□□□□□ -0.29
SMAD3-208ENST00000558827 USP4Q13107 963 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 SRSF5Q13243 272 aaKnown RBP13.26□□□□□ -0.29
SMAD3-208ENST00000558827 LRRC32Q14392 662 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 ZNF268Q14587 947 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-208ENST00000558827 PDGFRLQ15198 375 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 GVINP1Q7Z2Y8 2422 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 FILIP1Q7Z7B0 1213 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 UNC93AQ86WB7 457 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 SPATA20Q8TB22 786 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 OSCP1Q8WVF1 389 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 NELFBQ8WX92 580 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 ATRIPQ8WXE1 791 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 WBP2Q969T9 261 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 HEXIM2Q96MH2 286 aaKnown RBP13.26□□□□□ -0.29
SMAD3-208ENST00000558827 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
SMAD3-208ENST00000558827 NT5C1AQ9BXI3 368 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 SPTBN4Q9H254 2564 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 RAB20Q9NX57 234 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 ZMYM5Q9UJ78 669 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 NUDT5Q9UKK9 219 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 FBXO4Q9UKT5 387 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 ARHGAP26Q9UNA1 814 aa13.26□□□□□ -0.29
SMAD3-208ENST00000558827 PPP1R3GB7ZBB8 358 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 MDM4O15151 490 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 COCHO43405 550 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 CILPO75339 1184 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 RTN3O95197 1032 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-208ENST00000558827 TBX18O95935 607 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 CALCAP01258 141 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 FAM200BP0CF97 657 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 GTF2H1P32780 548 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 MAGEA9P43362 315 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 STIM1Q13586 685 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 EML3Q32P44 896 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 CCDC40Q4G0X9 1142 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms