RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ZNF132P52740 706 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 BCAT1P54687 386 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 SLC8A3P57103 927 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 GPRIN1Q7Z2K8 1008 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 MON1AQ86VX9 555 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 TTC30AQ86WT1 665 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 CMTM8Q8IZV2 173 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 ANKRD52Q8NB46 1076 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 TFAP2BQ92481 460 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 SLC46A2Q9BY10 475 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 PLA2G2FQ9BZM2 168 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 TRPV4Q9HBA0 871 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 PNPLA8Q9NP80 782 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 COMMD8Q9NX08 183 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 DNAJC12Q9UKB3 198 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-205ENST00000558428 CNTN6Q9UQ52 1028 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 LGALS16A8MUM7 142 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 HEPACAM2A8MVW5 462 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 HHLA1C9JL84 531 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 O00370 1275 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 CALCAP01258 141 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 SRFP11831 508 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 AVPR1AP37288 418 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 SIGLEC14Q08ET2 396 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 BST2Q10589 180 aaKnown RBP13.05□□□□□ -0.32
SMAD3-205ENST00000558428 RAPGEF1Q13905 1077 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 GRM2Q14416 872 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 IQCB1Q15051 598 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 KLHDC7AQ5VTJ3 777 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 LCLAT1Q6UWP7 414 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 PDZD8Q8NEN9 1154 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 SHC3Q92529 594 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 E2F7Q96AV8 911 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 SMG9Q9H0W8 520 aaKnown RBP13.05□□□□□ -0.32
SMAD3-205ENST00000558428 CBX8Q9HC52 389 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 IL37Q9NZH6 218 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 FHOD1Q9Y613 1164 aa13.05□□□□□ -0.32
SMAD3-205ENST00000558428 HELZP42694 1942 aaKnown RBP13.05□□□□□ -0.32
SMAD3-205ENST00000558428 TRAV19A0A0A6YYK7 116 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 C2orf78A6NCI8 922 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 ZNF840PA6NDX5 716 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 LRRC10BA6NIK2 292 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 SOBPA7XYQ1 873 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 M0QYV0 167 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 PRAMEF12O95522 483 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 CAVIN2O95810 425 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 CKMP06732 381 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 WEE1P30291 646 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 KIF11P52732 1056 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 TPM4P67936 248 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 GPC5P78333 572 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 UBXN1Q04323 297 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 PDE4CQ08493 712 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 STILQ15468 1287 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 CNGA2Q16280 664 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 DPY19L2P1Q6NXN4 242 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 VITQ6UXI7 678 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 APTXQ7Z2E3 356 aaKnown RBP13.04□□□□□ -0.32
SMAD3-205ENST00000558428 LUZP1Q86V48 1076 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 PIGZQ86VD9 579 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 UBA3Q8TBC4 463 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 DEPDC1BQ8WUY9 529 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-205ENST00000558428 ZSWIM1Q9BR11 485 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 UBXN6Q9BZV1 441 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 GMIPQ9P107 970 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-205ENST00000558428 FBXL21Q9UKT6 434 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMAD3-205ENST00000558428 NCANO14594 1321 aa13.04□□□□□ -0.32
SMAD3-205ENST00000558428 FAM92AA1XBS5 289 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 FAM86C2PA6NEL3 165 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 TMEM221A6NGB7 291 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 M0R296 226 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 TULP2O00295 520 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 FOXN3O00409 490 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-205ENST00000558428 XPO1O14980 1071 aaKnown RBP13.03□□□□□ -0.32
SMAD3-205ENST00000558428 CYP26A1O43174 497 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 THAP12O43422 761 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 MED7O43513 233 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 CFHP08603 1231 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 UCHL3P15374 230 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 PSMC3P17980 439 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 HDCP19113 662 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 RFX1P22670 979 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 GNA15P30679 374 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 KLK7P49862 253 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 PDE6CP51160 858 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 DRAP1Q14919 205 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-205ENST00000558428 SYCP1Q15431 976 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 MFSD6LQ8IWD5 586 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 YAF2Q8IY57 180 aa13.03□□□□□ -0.32
SMAD3-205ENST00000558428 CELF5Q8N6W0 485 aaKnown RBP13.03□□□□□ -0.32
SMAD3-205ENST00000558428 ARL14EPQ8N8R7 260 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms