RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 DENND4AQ7Z401 1863 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 MYO15AQ9UKN7 3530 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 TRAV19A0A0A6YYK7 116 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 PRR23AA6NEV1 266 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 CLDN5O00501 218 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 FCARP24071 287 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 GDI1P31150 447 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 CYP4F8P98187 520 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 AMPD2Q01433 879 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 GCNT1Q02742 428 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 TAF10Q12962 218 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 STILQ15468 1287 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 SNX30Q5VWJ9 437 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 TXNDC8Q6A555 127 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 CC2D1AQ6P1N0 951 aaPredicted RBP8.98□□□□□ -0.97
TPM1-213ENST00000558400 VITQ6UXI7 678 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 ZNF852Q6ZMS4 543 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 RBM43Q6ZSC3 357 aaKnown RBP8.98□□□□□ -0.97
TPM1-213ENST00000558400 ENOSF1Q7L5Y1 443 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 ASCL5Q7RTU5 278 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 C12orf29Q8N999 325 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 GPT2Q8TD30 523 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 CSGALNACT1Q8TDX6 532 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 WHAMMQ8TF30 809 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 ELMO3Q96BJ8 720 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 MSANTD3Q96H12 275 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 KCNK16Q96T55 309 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 DUSP16Q9BY84 665 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 SMOC2Q9H3U7 446 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 C8orf33Q9H7E9 229 aaPredicted RBP8.98□□□□□ -0.97
TPM1-213ENST00000558400 ANO10Q9NW15 660 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 SIT1Q9Y3P8 196 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 NOTCH4Q99466 2003 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 NCANO14594 1321 aa8.98□□□□□ -0.97
TPM1-213ENST00000558400 KANSL1LA0AUZ9 987 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 FAM92AA1XBS5 289 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 GTPBP10A4D1E9 387 aaKnown RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 KRBA1A5PL33 1030 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 ZNF840PA6NDX5 716 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 TNFRSF10BO14763 440 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 LRRN2O75325 713 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 CKMP06732 381 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 PAEPP09466 180 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 VDRP11473 427 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 CCDC130P13994 396 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 TCF3P15923 654 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 NPR3P17342 541 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 AOC1P19801 751 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 PTMSP20962 102 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 MTIF2P46199 727 aaKnown RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 PSEN1P49768 467 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 RAD23BP54727 409 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 VCPP55072 806 aaKnown RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 MAP3K7CLP57077 242 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 MLF2Q15773 248 aaPredicted RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 CCDC142Q17RM4 750 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 DPCR1Q3MIW9 517 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 ZNF394Q53GI3 561 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 SGO2Q562F6 1265 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 STXBP5Q5T5C0 1151 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 CCDC183Q5T5S1 534 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 ARHGAP17Q68EM7 881 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 GBP6Q6ZN66 633 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 PPM1KQ8N3J5 372 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 ANKRD52Q8NB46 1076 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 SLC4A11Q8NBS3 891 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 FLCNQ8NFG4 579 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 ST13P5Q8NFI4 369 aaPredicted RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 LMO3Q8TAP4 145 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 ENOX1Q8TC92 643 aaKnown RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 USP13Q92995 863 aaPredicted RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 FBXO32Q969P5 355 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 EXOC4Q96A65 974 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 CNOT6LQ96LI5 555 aaKnown RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 MED15Q96RN5 788 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 SMOQ99835 787 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 DDX23Q9BUQ8 820 aaKnown RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 TLR8Q9NR97 1041 aaKnown RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 KRT82Q9NSB4 513 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 FAM49BQ9NUQ9 324 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 HESX1Q9UBX0 185 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 CHORDC1Q9UHD1 332 aaPredicted RBP8.97□□□□□ -0.97
TPM1-213ENST00000558400 CA14Q9ULX7 337 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 BAHCC1Q9P281 2608 aa8.97□□□□□ -0.97
TPM1-213ENST00000558400 NRG2O14511 850 aaPredicted RBP8.96□□□□□ -0.98
TPM1-213ENST00000558400 SLC9A3R1O14745 358 aaPredicted RBP8.96□□□□□ -0.98
TPM1-213ENST00000558400 LETM1O95202 739 aaPredicted RBP8.96□□□□□ -0.98
TPM1-213ENST00000558400 ABL1P00519 1130 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 TPM2P07951 284 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 ADORA2BP29275 332 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 MAGEA9P43362 315 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 TUBP50607 506 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 SLC5A3P53794 718 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 MFAP3P55082 362 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 USP46P62068 366 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 SLC7A9P82251 487 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 LRMPQ12912 555 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 NR1H3Q13133 447 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 GRM2Q14416 872 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms