RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ARPINQ7Z6K5 226 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 MCOLN2Q8IZK6 566 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 EFCAB3Q8N7B9 438 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 POU5F2Q8N7G0 328 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 BANPQ8N9N5 519 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 FBXO36Q8NEA4 188 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 SHKBP1Q8TBC3 707 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 FAM172AQ8WUF8 416 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 SEMA4DQ92854 862 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 ALKBH8Q96BT7 664 aaKnown RBP5.29□□□□□ -1.56
HMG20A-204ENST00000558288 SH2D3AQ9BRG2 576 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 SLC13A1Q9BZW2 595 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 WWP1Q9H0M0 922 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 ARHGEF4Q9NR80 690 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 PTTG2Q9NZH5 202 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 NDUFA13Q9P0J0 144 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 RABGEF1Q9UJ41 708 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 APPL1Q9UKG1 709 aa5.29□□□□□ -1.56
HMG20A-204ENST00000558288 NAV1Q8NEY1 1877 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 NDC80O14777 642 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF189O75820 626 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PROSCO94903 275 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SLITRK3O94933 977 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SLURP2P0DP57 97 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SNHG28P0DPA3 235 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 RAG1P15918 1043 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 CRKP46108 304 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 FOLH1Q04609 750 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 KLF1Q13351 362 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PRKD1Q15139 912 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 CHI3L2Q15782 390 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 NFIL3Q16649 462 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 EFHC2Q5JST6 749 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 TCHHL1Q5QJ38 904 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 KLHDC10Q6PID8 442 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 OTOP1Q7RTM1 612 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 LZICQ8WZA0 190 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SHC3Q92529 594 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 WNK4Q96J92 1243 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 CNBD2Q96M20 576 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 P2RX7Q99572 595 aaKnown RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF395Q9H8N7 513 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PPCSQ9HAB8 311 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 TOPORSQ9NS56 1045 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 BTBD7Q9P203 1132 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 VAV3Q9UKW4 847 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PAIP2BQ9ULR5 123 aaKnown RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 AGTPBP1Q9UPW5 1226 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 TDRKHQ9Y2W6 561 aaKnown RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PCDHGA4Q9Y5G9 962 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 GMEB1Q9Y692 573 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ATRNL1Q5VV63 1379 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SPDYE16A6NNV3 312 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 TLR3O15455 904 aaKnown RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PSTPIP1O43586 416 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 DKC1O60832 514 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PMLP29590 882 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF280AP59817 542 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 BASP1P80723 227 aaKnown RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PDE1BQ01064 536 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 FAAP100Q0VG06 881 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 CBX3Q13185 183 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ALCAMQ13740 583 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 MAP3K21Q5TCX8 1036 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 IYDQ6PHW0 289 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 TRIM67Q6ZTA4 783 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 NLRX1Q86UT6 975 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 FBXO11Q86XK2 927 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 IFNL1Q8IU54 200 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 CBWD2Q8IUF1 395 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 CRLF3Q8IUI8 442 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 CDAN1Q8IWY9 1227 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 REM2Q8IYK8 340 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 LENG9Q96B70 501 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 APOPT1Q96IL0 206 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SERAC1Q96JX3 654 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 FAM84AQ96KN4 292 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 FAM81BQ96LP2 452 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ACCSQ96QU6 501 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 NACC1Q96RE7 527 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SIKE1Q9BRV8 207 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 AMNQ9BXJ7 453 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 RNF208Q9H0X6 261 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 GPAMQ9HCL2 828 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SSU72Q9NP77 194 aaKnown RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 HOMER2Q9NSB8 354 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ARHGEF38Q9NXL2 777 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 SAGE1Q9NXZ1 904 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 HSFX1Q9UBD0 423 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF70Q9UC06 446 aaPredicted RBP5.28□□□□□ -1.56
HMG20A-204ENST00000558288 PGAP2Q9UHJ9 254 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF232Q9UNY5 417 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF510Q9Y2H8 683 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 CLUHO75153 1309 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 UBE4BO95155 1302 aa5.28□□□□□ -1.56
HMG20A-204ENST00000558288 DENND3A2RUS2 1198 aa5.27□□□□□ -1.57
HMG20A-204ENST00000558288 CAPN8A6NHC0 703 aa5.27□□□□□ -1.57
HMG20A-204ENST00000558288 SPDYE2BA6NHP3 402 aa5.27□□□□□ -1.57
HMG20A-204ENST00000558288 P4HA2O15460 535 aa5.27□□□□□ -1.57
HMG20A-204ENST00000558288 BUD23O43709 281 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms