RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 C6orf222P0C671 652 aaPredicted RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 ACAT1P24752 427 aaKnown RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 AFF1P51825 1210 aaKnown RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 PDIA2Q13087 525 aaKnown RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 IFT88Q13099 833 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 ZBTB6Q15916 424 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 PPP6R3Q5H9R7 873 aaPredicted RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 RNF187Q5TA31 235 aaPredicted RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 OLFML1Q6UWY5 402 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 BBS12Q6ZW61 710 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 CPLX4Q7Z7G2 160 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 RASAL3Q86YV0 1011 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 GDAP1Q8TB36 358 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 SPATA18Q8TC71 538 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 FAM172AQ8WUF8 416 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 NKD2Q969F2 451 aaPredicted RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 HESX1Q9UBX0 185 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 DDX20Q9UHI6 824 aaKnown RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 HEY1Q9Y5J3 304 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 HTTP42858 3142 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 TMEM120BA0PK00 339 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 PRPSAP2O60256 369 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 ITGAVP06756 1048 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 RBP3P10745 1247 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 RPL22P35268 128 aaKnown RBP11.05□□□□□ -0.64
TPM1-210ENST00000558264 BASP1P80723 227 aaKnown RBP11.05□□□□□ -0.64
TPM1-210ENST00000558264 KRT81Q14533 505 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 FBXO47Q5MNV8 452 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 UBXN11Q5T124 520 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 ERMARDQ5T6L9 678 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 RNASEH2BQ5TBB1 312 aaKnown RBP11.05□□□□□ -0.64
TPM1-210ENST00000558264 TWF2Q6IBS0 349 aaKnown RBP11.05□□□□□ -0.64
TPM1-210ENST00000558264 NETO2Q8NC67 525 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 BBOF1Q8ND07 529 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 KBTBD7Q8WVZ9 684 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 CNPY3Q9BT09 278 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 FAM129AQ9BZQ8 928 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 AP5M1Q9H0R1 490 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 CNOT10Q9H9A5 744 aaKnown RBP11.05□□□□□ -0.64
TPM1-210ENST00000558264 UNCXA6NJT0 531 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 CLDN5O00501 218 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 CTGFP29279 349 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 PTPN7P35236 360 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 MPP2Q14168 576 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 EFTUD2Q15029 972 aaKnown RBP eCLIP11.05□□□□□ -0.641e-5■■■□□ 16.7
TPM1-210ENST00000558264 FNBP1LQ5T0N5 605 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 FAXCQ5TGI0 409 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 DRICH1Q6PGQ1 229 aaPredicted RBP11.05□□□□□ -0.64
TPM1-210ENST00000558264 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
TPM1-210ENST00000558264 SLC2A14Q8TDB8 520 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 TMEM109Q9BVC6 243 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 MAK16Q9BXY0 300 aaKnown RBP11.05□□□□□ -0.64
TPM1-210ENST00000558264 KIF9Q9HAQ2 790 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 PLEKHA5Q9HAU0 1116 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 PCDH9Q9HC56 1237 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 CNTN3Q9P232 1028 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 NAALADL1Q9UQQ1 740 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 IPPQ9Y573 584 aa11.05□□□□□ -0.64
TPM1-210ENST00000558264 SYNJ2BP-COX16A0A087WUM0 186 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 EXOC1LA0A1B0GW35 172 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 C17orf102A2RUQ5 167 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 KPNA7A9QM74 516 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 TNPO2O14787 897 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 PGK1P00558 417 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 RARBP10826 455 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 TKTP29401 623 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 CORO7P57737 925 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 ADAM17P78536 824 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 DPYSL3Q14195 570 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 FSCN1Q16658 493 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 DARS2Q6PI48 645 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 VSTM1Q6UX27 236 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 CXCL17Q6UXB2 119 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 ALKAL1Q6UXT8 129 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 NT5DC4Q86YG4 428 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 LRRC34Q8IZ02 419 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 SLC35F5Q8WV83 523 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 DYDC1Q8WWB3 177 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 CPT1BQ92523 772 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 PRCCQ92733 491 aaPredicted RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.644e-9■□□□□ 9.5
TPM1-210ENST00000558264 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 DRG1Q9Y295 367 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 NR2E3Q9Y5X4 410 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 TMEM63AO94886 807 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 SSTR1P30872 391 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 SDC4P31431 198 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 GNL1P36915 607 aaPredicted RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 CPT1AP50416 773 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 GSCP56915 257 aaPredicted RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 TNFAIP8L3Q5GJ75 292 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 FAM47CQ5HY64 1035 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 MFSD5Q6N075 450 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 SMG8Q8ND04 991 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 LPPQ93052 612 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms