RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 NT5C1AQ9BXI3 368 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.13□□□□□ -0.47
RORA-207ENST00000558234 CDY1Q9Y6F8 540 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 USP3Q9Y6I4 520 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 LSM8O95777 96 aaKnown RBP12.13□□□□□ -0.47
RORA-207ENST00000558234 RPL17P18621 184 aaKnown RBP12.13□□□□□ -0.47
RORA-207ENST00000558234 PDE6CP51160 858 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 CNGA2Q16280 664 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 COG1Q8WTW3 980 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 MYLPFQ96A32 169 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 CYFIP2Q96F07 1278 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 C8orf48Q96LL4 319 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 NOX5Q96PH1 765 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 OSBPL9Q96SU4 736 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 NSUN3Q9H649 340 aaKnown RBP12.13□□□□□ -0.47
RORA-207ENST00000558234 URODP06132 367 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 VDRP11473 427 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 GPD2P43304 727 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 PLA2G4AP47712 749 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 BPIFB4P59827 614 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 TRIM72Q6ZMU5 477 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 CLEC20AQ6ZU45 233 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 TMEM150AQ86TG1 271 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 MYRFLQ96LU7 910 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 CERS4Q9HA82 394 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 EFCAB8A8MWE9 144 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 BUB1O43683 1085 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 BUB1BO60566 1050 aaPredicted RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 TNFAIP3P21580 790 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 ACAT1P24752 427 aaKnown RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 PCSK1P29120 753 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 BNIPLQ7Z465 357 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 TXLNBQ8N3L3 684 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 KCTD13Q8WZ19 329 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 IMPG2Q9BZV3 1241 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 ZNF518BQ9C0D4 1074 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 DOCK8Q8NF50 2099 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 UQCRHLA0A096LP55 91 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 DYNC1I1O14576 645 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 ZNF185O15231 689 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 UQCRHP07919 91 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 ZDHHC11BP0C7U3 371 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 HMGA1P17096 107 aaKnown RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 GNA15P30679 374 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 YWHAEP62258 255 aaKnown RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 GPC5P78333 572 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 EIF4EBP2Q13542 120 aaPredicted RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 CTXN3Q4LDR2 81 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 ARTNQ5T4W7 220 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 SNX30Q5VWJ9 437 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 FAM35AQ86V20 835 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.12□□□□□ -0.47
RORA-207ENST00000558234 PRDM12Q9H4Q4 367 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 ANKZF1Q9H8Y5 726 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 SRGAP2O75044 1071 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 CXCL14O95715 111 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 H2AFXP16104 143 aaPredicted RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 RHOT2Q8IXI1 618 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 MSANTD4Q8NCY6 345 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 STK32AQ8WU08 396 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 TRMT2BQ96GJ1 504 aaKnown RBP12.12□□□□□ -0.47
RORA-207ENST00000558234 MMS19Q96T76 1030 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
RORA-207ENST00000558234 NCK2O43639 380 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 IBSPP21815 317 aaPredicted RBP12.11□□□□□ -0.47
RORA-207ENST00000558234 ORC1Q13415 861 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 PLPP4Q5VZY2 271 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 ACOT1Q86TX2 421 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 SAR1BQ9Y6B6 198 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 TBX10O75333 385 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 CTNNA2P26232 953 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 PSMC1P62191 440 aaKnown RBP12.11□□□□□ -0.47
RORA-207ENST00000558234 TCEAL5Q5H9L2 206 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 PRSS36Q5K4E3 855 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 ZNF697Q5TEC3 545 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 SPPL2BQ8TCT7 592 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 DUSP16Q9BY84 665 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 HCFC2Q9Y5Z7 792 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 MOSPD3O75425 235 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 MYBL1P10243 752 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 CCDC130P13994 396 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 MDH1BQ5I0G3 518 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 SPOUT1Q5T280 376 aaKnown RBP12.11□□□□□ -0.47
RORA-207ENST00000558234 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 KHSRPQ92945 711 aaKnown RBP eCLIP12.11□□□□□ -0.475e-8■■■□□ 18.5
RORA-207ENST00000558234 COMMD8Q9NX08 183 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 UVRAGQ9P2Y5 699 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 MTUS1Q9ULD2 1270 aa12.11□□□□□ -0.47
RORA-207ENST00000558234 A8MXQ7 604 aa12.1□□□□□ -0.47
RORA-207ENST00000558234 LINC01565O15544 149 aa12.1□□□□□ -0.47
RORA-207ENST00000558234 OR1D2P34982 312 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms