RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SPECC1L-ADORA2AF8WAN1 911 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 RTN3O95197 1032 aaPredicted RBP10.76□□□□□ -0.69
USP3-207ENST00000558218 SMC2O95347 1197 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 PRAMEF12O95522 483 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 ASS1P00966 412 aaKnown RBP10.76□□□□□ -0.69
USP3-207ENST00000558218 LMNAP02545 664 aaKnown RBP10.76□□□□□ -0.69
USP3-207ENST00000558218 KRT13P13646 458 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 HDCP19113 662 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 NR2F2P24468 414 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 CTHP32929 405 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 CASP4P49662 377 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 CCR3P51677 355 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 PSMC1P62191 440 aaKnown RBP10.76□□□□□ -0.69
USP3-207ENST00000558218 RUNX3Q13761 415 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 TXNDC8Q6A555 127 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 FMR1NBQ8N0W7 255 aaPredicted RBP10.76□□□□□ -0.69
USP3-207ENST00000558218 SPEM1Q8N4L4 309 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 TTC39CQ8N584 583 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 ZBTB44Q8NCP5 570 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 B3GALNT2Q8NCR0 500 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 ENGASEQ8NFI3 743 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 SPATA20Q8TB22 786 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 ATRIPQ8WXE1 791 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 OVCA2Q8WZ82 227 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 CHAMP1Q96JM3 812 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 SPSB2Q99619 263 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 TMUB1Q9BVT8 246 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 GOLPH3LQ9H4A5 285 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 CYP3A43Q9HB55 503 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 PRMT8Q9NR22 394 aaPredicted RBP10.76□□□□□ -0.69
USP3-207ENST00000558218 ZSCAN32Q9NX65 697 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 TRPM5Q9NZQ8 1165 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 GCNT4Q9P109 453 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 NCANO14594 1321 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 ATP8B3O60423 1300 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 TICRRQ7Z2Z1 1910 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 ZFHX2Q9C0A1 2572 aaPredicted RBP10.75□□□□□ -0.69
USP3-207ENST00000558218 COL4A2P08572 1712 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 FAM186AA6NE01 2351 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 CACNA1AO00555 2505 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 HCRTO43612 131 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 STX10O60499 249 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 AKAP3O75969 853 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 PAPSS2O95340 614 aaPredicted RBP10.75□□□□□ -0.69
USP3-207ENST00000558218 VNN1O95497 513 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 HOXA6P31267 233 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 PPP1R2P41236 205 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 CXCL12P48061 93 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 DLG4P78352 724 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 MTAPQ13126 283 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 ZCWPW2Q504Y3 356 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 MDH1BQ5I0G3 518 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 ZNF658Q5TYW1 1059 aaPredicted RBP10.75□□□□□ -0.69
USP3-207ENST00000558218 SDHAF4Q5VUM1 108 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 ASCL5Q7RTU5 278 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 NUP93Q8N1F7 819 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 CCDC150Q8NCX0 1101 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 PDZD8Q8NEN9 1154 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 SLITRK1Q96PX8 696 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 B3GNT5Q9BYG0 378 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 IMPG2Q9BZV3 1241 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 GTSE1Q9NYZ3 720 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 IL37Q9NZH6 218 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 NDRG2Q9UN36 371 aaKnown RBP10.75□□□□□ -0.69
USP3-207ENST00000558218 ARHGAP26Q9UNA1 814 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 NME7Q9Y5B8 376 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 PTPRDP23468 1912 aa10.75□□□□□ -0.69
USP3-207ENST00000558218 ZNF840PA6NDX5 716 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 F8VP50 259 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 TRDMT1O14717 391 aaKnown RBP10.74□□□□□ -0.69
USP3-207ENST00000558218 CETN3O15182 167 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 KINO60870 393 aaKnown RBP10.74□□□□□ -0.69
USP3-207ENST00000558218 LILRB5O75023 590 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 ATG13O75143 517 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 TADA3O75528 432 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 OLFM2O95897 454 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 GGCXP38435 758 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 CDR1P51861 262 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 CDH8P55286 799 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 SLC7A9P82251 487 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 FKBP3Q00688 224 aaKnown RBP10.74□□□□□ -0.69
USP3-207ENST00000558218 CSTF1Q05048 431 aaKnown RBP10.74□□□□□ -0.69
USP3-207ENST00000558218 NR1H3Q13133 447 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 C1orf220Q5T0J3 134 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 SNX30Q5VWJ9 437 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 FAM186BQ8IYM0 893 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 CCDC26Q8TAB7 109 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 OSCP1Q8WVF1 389 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 SMARCD1Q96GM5 515 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 SLC6A16Q9GZN6 736 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 TMEM8AQ9HCN3 771 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 CSNK1G1Q9HCP0 422 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 PRDM9Q9NQV7 894 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 MAPK8IP1Q9UQF2 711 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 CCL26Q9Y258 94 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 PATJQ8NI35 1801 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 OBSL1O75147 1896 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 ANAPC1Q9H1A4 1944 aa10.74□□□□□ -0.69
USP3-207ENST00000558218 FAM92AA1XBS5 289 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms