RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 IRF7Q92985 503 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 MYRFLQ96LU7 910 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 MED15Q96RN5 788 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 SLC46A2Q9BY10 475 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 DUSP16Q9BY84 665 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 PLA2G2FQ9BZM2 168 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 PDCL3Q9H2J4 239 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 KIF9Q9HAQ2 790 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 IL21Q9HBE4 155 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 LRRC4Q9HBW1 653 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 ARHGEF3Q9NR81 526 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 TLR8Q9NR97 1041 aaKnown RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 GMIPQ9P107 970 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 APEX2Q9UBZ4 518 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 TSPAN16Q9UKR8 245 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 ZNF638Q14966 1978 aaKnown RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 MYO16Q9Y6X6 1858 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 C2orf78A6NCI8 922 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 GOLGA6L19H0YKK7 550 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 THAP12O43422 761 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 GPR37L1O60883 481 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 BEST1O76090 585 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 PRAMEF12O95522 483 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 PAEPP09466 180 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 FCARP24071 287 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 PON1P27169 355 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 ZNF165P49910 485 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 KPNA1P52294 538 aaPredicted RBP9.48□□□□□ -0.89
SPG11-207ENST00000558138 BST2Q10589 180 aaKnown RBP9.48□□□□□ -0.89
SPG11-207ENST00000558138 KRT31Q15323 416 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 ARHGAP17Q68EM7 881 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 PHLDB3Q6NSJ2 640 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 HFE2Q6ZVN8 426 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 PAQR9Q6ZVX9 377 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 TADA2BQ86TJ2 420 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 SIX6OS1Q8N1H7 587 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 TTC8Q8TAM2 541 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 LMO3Q8TAP4 145 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 UBA3Q8TBC4 463 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 OVCA2Q8WZ82 227 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 GOLGA1Q92805 767 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 SHDQ96IW2 340 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 TTLL2Q9BWV7 592 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 TDP1Q9NUW8 608 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 TMEM30AQ9NV96 361 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 COMMD8Q9NX08 183 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 SMPD4Q9NXE4 827 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 CHORDC1Q9UHD1 332 aaPredicted RBP9.48□□□□□ -0.89
SPG11-207ENST00000558138 NAGPAQ9UK23 515 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 DNAJC12Q9UKB3 198 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 KIAA1257Q9ULG3 409 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 HCN4Q9Y3Q4 1203 aa9.48□□□□□ -0.89
SPG11-207ENST00000558138 NCOR1O75376 2440 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 NUP210Q8TEM1 1887 aaPredicted RBP9.47□□□□□ -0.89
SPG11-207ENST00000558138 ZNF840PA6NDX5 716 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 CYP26A1O43174 497 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 TADA3O75528 432 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 SETSIPP0DME0 302 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 IRF1P10914 325 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 RALAP11233 206 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 LCP1P13796 627 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 GNA15P30679 374 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 IFNAR2P48551 515 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 RGS7P49802 495 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 TKTL1P51854 596 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 COPB1P53618 953 aaKnown RBP9.47□□□□□ -0.89
SPG11-207ENST00000558138 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 APBA1Q02410 837 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 UBXN1Q04323 297 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 GOLGA8FQ08AF8 430 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 GOLGA8DPQ0D2H9 430 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 UBXN2BQ14CS0 331 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 STILQ15468 1287 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 MLF2Q15773 248 aaPredicted RBP9.47□□□□□ -0.89
SPG11-207ENST00000558138 FILIP1LQ4L180 1135 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 ARHGAP29Q52LW3 1261 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 HECTD3Q5T447 861 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 TPRG1Q6ZUI0 275 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 RSRC2Q7L4I2 434 aaKnown RBP9.47□□□□□ -0.89
SPG11-207ENST00000558138 GPRIN1Q7Z2K8 1008 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 TMEM150AQ86TG1 271 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 PIGZQ86VD9 579 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 MFSD6LQ8IWD5 586 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 ANKRD52Q8NB46 1076 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 ZMIZ2Q8NF64 920 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 USP13Q92995 863 aaPredicted RBP9.47□□□□□ -0.89
SPG11-207ENST00000558138 ZFYVE19Q96K21 471 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 KREMEN1Q96MU8 473 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 CYP2S1Q96SQ9 504 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 TBC1D17Q9HA65 648 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 TRPV4Q9HBA0 871 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 CSNK1G1Q9HCP0 422 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 PNPLA8Q9NP80 782 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 SLC2A4RGQ9NR83 387 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 ST7Q9NRC1 585 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 HEBP1Q9NRV9 189 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 OBP2AQ9NY56 170 aa9.47□□□□□ -0.89
SPG11-207ENST00000558138 WNT16Q9UBV4 365 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms