RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZNHIT6Q9NWK9 470 aaKnown RBP22.44■■□□□ 1.18
CASC4-204ENST00000557945 TNFRSF10BO14763 440 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 SERPING1P05155 500 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 TNFAIP3P21580 790 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 YWHAQP27348 245 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 PRKCIP41743 596 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 MTHFRP42898 656 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 SMAD4Q13485 552 aaKnown RBP22.43■■□□□ 1.18
CASC4-204ENST00000557945 PMF1Q6P1K2 205 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 PDZD4Q76G19 769 aaPredicted RBP22.43■■□□□ 1.18
CASC4-204ENST00000557945 TMEM35BQ8NCS4 154 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 C1orf131Q8NDD1 294 aaKnown RBP22.43■■□□□ 1.18
CASC4-204ENST00000557945 DNAJC7Q99615 494 aa22.43■■□□□ 1.18
CASC4-204ENST00000557945 ZNF334Q9HCZ1 680 aaPredicted RBP22.43■■□□□ 1.18
CASC4-204ENST00000557945 USP15Q9Y4E8 981 aaPredicted RBP22.43■■□□□ 1.18
CASC4-204ENST00000557945 FAM170AA1A519 330 aa22.42■■□□□ 1.18
CASC4-204ENST00000557945 LEXMQ3ZCV2 418 aa22.42■■□□□ 1.18
CASC4-204ENST00000557945 NOX5Q96PH1 765 aa22.42■■□□□ 1.18
CASC4-204ENST00000557945 UXTQ9UBK9 157 aaPredicted RBP22.42■■□□□ 1.18
CASC4-204ENST00000557945 CYTH4Q9UIA0 394 aa22.42■■□□□ 1.18
CASC4-204ENST00000557945 BZW2Q9Y6E2 419 aaKnown RBP22.42■■□□□ 1.18
CASC4-204ENST00000557945 GRXCR2A6NFK2 248 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 PIK3R2O00459 728 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 LSM8O95777 96 aaKnown RBP22.41■■□□□ 1.18
CASC4-204ENST00000557945 LCP1P13796 627 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 TKTL1P51854 596 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 KIF11P52732 1056 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 TFF2Q03403 129 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 NAA35Q5VZE5 725 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 TRIM72Q6ZMU5 477 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 ZNF571Q7Z3V5 609 aaPredicted RBP22.41■■□□□ 1.18
CASC4-204ENST00000557945 TMC8Q8IU68 726 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 SIX6OS1Q8N1H7 587 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 WDTC1Q8N5D0 677 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 LEMD2Q8NC56 503 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 KCTD13Q8WZ19 329 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 FBXO32Q969P5 355 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 TRMT2BQ96GJ1 504 aaKnown RBP22.41■■□□□ 1.18
CASC4-204ENST00000557945 HSFY1Q96LI6 401 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 GCNAQ96QF7 691 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 LRRC3Q9BY71 257 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 FBXO44Q9H4M3 255 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 COMMD8Q9NX08 183 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 REV3LO60673 3130 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 CLUHO75153 1309 aa22.41■■□□□ 1.18
CASC4-204ENST00000557945 GOLGA6L6A8MZA4 724 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 MBTPS2O43462 519 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 FSHRP23945 695 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 GABRR2P28476 465 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 HNRNPH3P31942 346 aaKnown RBP22.4■■□□□ 1.18
CASC4-204ENST00000557945 ADIGQ0VDE8 80 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 TAF10Q12962 218 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 PDCLQ13371 301 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 CBX2Q14781 532 aaPredicted RBP22.4■■□□□ 1.18
CASC4-204ENST00000557945 HGSNATQ68CP4 663 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 STK32AQ8WU08 396 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 CPA5Q8WXQ8 436 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 MYRFLQ96LU7 910 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 NECTIN4Q96NY8 510 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 SLITRK1Q96PX8 696 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 PCDHB18PQ96TA0 734 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 TTLL2Q9BWV7 592 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 WDR6Q9NNW5 1121 aaKnown RBP22.4■■□□□ 1.18
CASC4-204ENST00000557945 IMPACTQ9P2X3 320 aa22.4■■□□□ 1.18
CASC4-204ENST00000557945 MRPS23Q9Y3D9 190 aaKnown RBP22.4■■□□□ 1.18
CASC4-204ENST00000557945 ZNF197O14709 1029 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 FGF19O95750 216 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 GJA1P17302 382 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 ACADSBP45954 432 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 EPHA5P54756 1037 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 NOMO3P69849 1222 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 ARID5BQ14865 1188 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 RAB41Q5JT25 222 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 TC2NQ8N9U0 490 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.39■■□□□ 1.18
CASC4-204ENST00000557945 SUSD6Q92537 303 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 ANP32BQ92688 251 aaKnown RBP22.39■■□□□ 1.18
CASC4-204ENST00000557945 TCEAL4Q96EI5 215 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 PPP1R13BQ96KQ4 1090 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.39■■□□□ 1.18
CASC4-204ENST00000557945 SLC4A5Q9BY07 1137 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 ULBP1Q9BZM6 244 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 ATXN3LQ9H3M9 355 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 SYNCQ9H7C4 482 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 THEGQ9P2T0 379 aa22.39■■□□□ 1.18
CASC4-204ENST00000557945 A0A1W2PRU2 124 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 CYP1A1P04798 512 aaPredicted RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 PLEKP08567 350 aaPredicted RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 USP17L7P0C7H9 530 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 CDC25CP30307 473 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 CDH5P33151 784 aaPredicted RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 CCR2P41597 374 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 CLEC16AQ2KHT3 1053 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 SLC5A9Q2M3M2 681 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 PTCRAQ6ISU1 281 aaPredicted RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 WDR59Q6PJI9 974 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 VPS36Q86VN1 386 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 ITFG1Q8TB96 612 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 ING5Q8WYH8 240 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 CPXM1Q96SM3 734 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms