RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 MED15Q96RN5 788 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 FNBP1Q96RU3 617 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 P2RY13Q9BPV8 354 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 ABCB6Q9NP58 842 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 TMLHEQ9NVH6 421 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 GDAP2Q9NXN4 497 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 MAGED2Q9UNF1 606 aaPredicted RBP17.73■□□□□ 0.43
NEK9-211ENST00000557673 CCL26Q9Y258 94 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 SDK1Q7Z5N4 2213 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 LRRIQ3A6PVS8 624 aaPredicted RBP17.72■□□□□ 0.43
NEK9-211ENST00000557673 TM4SF5O14894 197 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 HCRTO43612 131 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 RNF40O75150 1001 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 RHOBTB1O94844 696 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 EPB41P11171 864 aaKnown RBP17.72■□□□□ 0.43
NEK9-211ENST00000557673 ACAT1P24752 427 aaKnown RBP17.72■□□□□ 0.43
NEK9-211ENST00000557673 CLDN10P78369 228 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 SHC2P98077 582 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 ENPEPQ07075 957 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 STX1AQ16623 288 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 SKOR2Q2VWA4 1001 aaPredicted RBP17.72■□□□□ 0.43
NEK9-211ENST00000557673 TXNDC8Q6A555 127 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 TRIM68Q6AZZ1 485 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 PKN3Q6P5Z2 889 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 SASS6Q6UVJ0 657 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 TMC2Q8TDI7 906 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 ATP2A3Q93084 1043 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 ACDQ96AP0 544 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 HPDLQ96IR7 371 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 CEP63Q96MT8 703 aa17.72■□□□□ 0.43
NEK9-211ENST00000557673 DDX43Q9NXZ2 648 aaKnown RBP17.72■□□□□ 0.43
NEK9-211ENST00000557673 R3HCC1Q9Y3T6 440 aaKnown RBP17.72■□□□□ 0.43
NEK9-211ENST00000557673 OTOL1A6NHN0 477 aaPredicted RBP17.71■□□□□ 0.43
NEK9-211ENST00000557673 EGFP01133 1207 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 TNNI1P19237 187 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 PMLP29590 882 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 MPLP40238 635 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 GALK1P51570 392 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 DLG4P78352 724 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 MYO1EQ12965 1108 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 NR1H3Q13133 447 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 CCDC6Q16204 474 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 CCDC142Q17RM4 750 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 C1orf220Q5T0J3 134 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 N4BP2L1Q5TBK1 243 aaPredicted RBP17.71■□□□□ 0.43
NEK9-211ENST00000557673 SYT13Q7L8C5 426 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 TRAPPC11Q7Z392 1133 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 ADGRF2Q8IZF7 708 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 TMEM86AQ8N2M4 240 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 TOP6BLQ8N6T0 577 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 TRMT2BQ96GJ1 504 aaKnown RBP17.71■□□□□ 0.43
NEK9-211ENST00000557673 ACBD6Q9BR61 282 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 PI4K2AQ9BTU6 479 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 ANO10Q9NW15 660 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 SPAG17Q6Q759 2223 aa17.71■□□□□ 0.43
NEK9-211ENST00000557673 GREB1Q4ZG55 1949 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 APBB3O95704 486 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 USP17L7P0C7H9 530 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 TRIM49P0CI25 452 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 TRIM49CP0CI26 452 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 KRT13P13646 458 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 ARSAP15289 507 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 ERCC5P28715 1186 aaPredicted RBP17.7■□□□□ 0.42
NEK9-211ENST00000557673 HOXC13P31276 330 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 GJA4P35212 333 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 VAMP7P51809 220 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 MCCD1P59942 119 aaPredicted RBP17.7■□□□□ 0.42
NEK9-211ENST00000557673 MYL7Q01449 175 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 TYRO3Q06418 890 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 SOWAHAQ2M3V2 549 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 PLK5Q496M5 336 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 CT47A1Q5JQC4 288 aaPredicted RBP17.7■□□□□ 0.42
NEK9-211ENST00000557673 INTS6LQ5JSJ4 861 aaKnown RBP17.7■□□□□ 0.42
NEK9-211ENST00000557673 C11orf57Q6ZUT1 292 aaPredicted RBP17.7■□□□□ 0.42
NEK9-211ENST00000557673 C11orf74Q86VG3 221 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 SPATA18Q8TC71 538 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 OSCP1Q8WVF1 389 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 LSM14BQ9BX40 385 aaKnown RBP17.7■□□□□ 0.42
NEK9-211ENST00000557673 ECT2Q9H8V3 914 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 DUS2Q9NX74 493 aaKnown RBP17.7■□□□□ 0.42
NEK9-211ENST00000557673 EBF1Q9UH73 591 aa17.7■□□□□ 0.42
NEK9-211ENST00000557673 TRAV19A0A0A6YYK7 116 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 GABRDO14764 452 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 IFNAR2P48551 515 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 MTF1Q14872 753 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 RNF43Q68DV7 783 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 RPLP0P6Q8NHW5 317 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 KBTBD7Q8WVZ9 684 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 ZNF516Q92618 1163 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 CD101Q93033 1021 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 CHFRQ96EP1 664 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 MYRFLQ96LU7 910 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 HHIPQ96QV1 700 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 PKMYT1Q99640 499 aa17.69■□□□□ 0.42
NEK9-211ENST00000557673 NOL4O94818 638 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 CST3P01034 146 aaPredicted RBP17.68■□□□□ 0.42
NEK9-211ENST00000557673 CKMP06732 381 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 PCSK1P29120 753 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 LHX1P48742 406 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 GPR15P49685 360 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms