RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ENO1P06733 434 aaKnown RBP12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 NR3C2P08235 984 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 KRT3P12035 628 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 KCNA2P16389 499 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 AMPD1P23109 780 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 RFC1P35251 1148 aaPredicted RBP12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 SP4Q02446 784 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF394Q53GI3 561 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 XKR3Q5GH77 459 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 TTC39BQ5VTQ0 682 aaPredicted RBP12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 CCDC60Q8IWA6 550 aaPredicted RBP12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 SCUBE1Q8IWY4 988 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 WDTC1Q8N5D0 677 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 KCNN1Q92952 543 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 C7orf26Q96N11 449 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 TARS2Q9BW92 718 aaKnown RBP12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 FAM192AQ9GZU8 254 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 CISHQ9NSE2 258 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 ETAA1Q9NY74 926 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 PPARGC1AQ9UBK2 798 aaKnown RBP12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 PCDHGC3Q9UN70 934 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 DOCK5Q9H7D0 1870 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 ANKRD33BA6NCL7 494 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 CAPN14A8MX76 684 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 SPECC1L-ADORA2AF8WAN1 911 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 RBP3P10745 1247 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 HMGB2P26583 209 aaKnown RBP12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 IL1R2P27930 398 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 NAMPTP43490 491 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 SLC26A11Q86WA9 606 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 KBTBD2Q8IY47 623 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 TMEM143Q96AN5 459 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 GBP5Q96PP8 586 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 WWP1Q9H0M0 922 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 JPH1Q9HDC5 661 aaPredicted RBP12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 DDX43Q9NXZ2 648 aaKnown RBP12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 FBXO40Q9UH90 709 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 TEX264Q9Y6I9 313 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 SIP14410 1827 aa12.33□□□□□ -0.44
VIPAS39-211ENST00000557658 TRIM49D1C9J1S8 452 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 E5RJQ4 531 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 AP1G2O75843 785 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 KRT37O76014 449 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 CST3P01034 146 aaPredicted RBP12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 ANPEPP15144 967 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 POLE2P56282 527 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 AP2B1P63010 937 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 TMPRSS15P98073 1019 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 DNAL1Q4LDG9 190 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 LGSNQ5TDP6 509 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 FKBP1CQ5VVH2 108 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 MTHFD1LQ6UB35 978 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 RFX8Q6ZV50 586 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 KCTD6Q8NC69 237 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 RBM15BQ8NDT2 890 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 PHC3Q8NDX5 983 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 FNIP1Q8TF40 1166 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 NIF3L1Q9GZT8 377 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 PNPLA8Q9NP80 782 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 DNAJB4Q9UDY4 337 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 TAGLN3Q9UI15 199 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 KLHL33A6NCF5 533 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 TM7SF2O76062 418 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 SNRPAP09012 282 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 CD48P09326 243 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 WEE2P0C1S8 567 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 HARSP12081 509 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 STIP1P31948 543 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 ACTR2P61160 394 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 TGFB2P61812 414 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 ROR1Q01973 937 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 CDK18Q07002 472 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 BAATQ14032 418 aaPredicted RBP12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 TBCCQ15814 346 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 RSBN1LQ6PCB5 846 aaPredicted RBP12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 TREML1Q86YW5 311 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 CTAGE3PQ8IX95 158 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 ARFGAP1Q8N6T3 406 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 JOSD2Q8TAC2 188 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 E2F7Q96AV8 911 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 PORCNQ9H237 461 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 NDE1Q9NXR1 346 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 PPME1Q9Y570 386 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 KAT6AQ92794 2004 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 ADGRA2Q96PE1 1338 aa12.32□□□□□ -0.44
VIPAS39-211ENST00000557658 FAM155BO75949 473 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ATP5BP06576 529 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 MYL6P60660 151 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 DSG1Q02413 1049 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 BST1Q10588 318 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 KCNJ11Q14654 390 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 SEZ6Q53EL9 994 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 FOXB2Q5VYV0 432 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 SCARA3Q6AZY7 606 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 DARS2Q6PI48 645 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ABHD15Q6UXT9 468 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 RIPOR1Q6ZS17 1223 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms