RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 SLC7A9P82251 487 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 PON2Q15165 354 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 EML3Q32P44 896 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 TMEM196Q5HYL7 178 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 SNX30Q5VWJ9 437 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 KRT39Q6A163 491 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 CC2D1AQ6P1N0 951 aaPredicted RBP15.9■□□□□ 0.14
SEC23A-214ENST00000557437 TSSK4Q6SA08 328 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 SYNPOQ8N3V7 929 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 SPEM1Q8N4L4 309 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 KIAA1958Q8N8K9 716 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 SUMF1Q8NBK3 374 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 ZMIZ2Q8NF64 920 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 SH3RF2Q8TEC5 729 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 OVCA2Q8WZ82 227 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 ERCC4Q92889 916 aaPredicted RBP15.9■□□□□ 0.14
SEC23A-214ENST00000557437 SMARCE1Q969G3 411 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 SMARCD1Q96GM5 515 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 FAXDC2Q96IV6 333 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 TWNKQ96RR1 684 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 IMPG2Q9BZV3 1241 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 RNF38Q9H0F5 515 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 DMAP1Q9NPF5 467 aaPredicted RBP15.9■□□□□ 0.14
SEC23A-214ENST00000557437 COMMD8Q9NX08 183 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 ZSCAN32Q9NX65 697 aa15.9■□□□□ 0.14
SEC23A-214ENST00000557437 RIF1Q5UIP0 2472 aaKnown RBP15.9■□□□□ 0.14
SEC23A-214ENST00000557437 HELZP42694 1942 aaKnown RBP15.9■□□□□ 0.14
SEC23A-214ENST00000557437 FRYLO94915 3013 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 TRDMT1O14717 391 aaKnown RBP15.89■□□□□ 0.13
SEC23A-214ENST00000557437 SLC16A3O15427 465 aaKnown RBP15.89■□□□□ 0.13
SEC23A-214ENST00000557437 CCDC130P13994 396 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 YWHAQP27348 245 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 CCR3P51677 355 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 FKBP3Q00688 224 aaKnown RBP15.89■□□□□ 0.13
SEC23A-214ENST00000557437 LRRC63Q05C16 580 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 ORC1Q13415 861 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 ANKRD40Q6AI12 368 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 C12orf29Q8N999 325 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 PDZD8Q8NEN9 1154 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 SLC2A14Q8TDB8 520 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 WHAMMQ8TF30 809 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 SEMA4DQ92854 862 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 SMOQ99835 787 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 NIF3L1Q9GZT8 377 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 ECT2Q9H8V3 914 aa15.89■□□□□ 0.13
SEC23A-214ENST00000557437 DUS2Q9NX74 493 aaKnown RBP15.89■□□□□ 0.13
SEC23A-214ENST00000557437 HOOK1Q9UJC3 728 aaKnown RBP15.89■□□□□ 0.13
SEC23A-214ENST00000557437 CIZ1Q9ULV3 898 aaPredicted RBP15.89■□□□□ 0.13
SEC23A-214ENST00000557437 WDR87Q6ZQQ6 2873 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 KINO60870 393 aaKnown RBP15.88■□□□□ 0.13
SEC23A-214ENST00000557437 CILPO75339 1184 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 AP1G2O75843 785 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 BEST1O76090 585 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 CLSTN1O94985 981 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 ZDHHC11BP0C7U3 371 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 EPB41P11171 864 aaKnown RBP15.88■□□□□ 0.13
SEC23A-214ENST00000557437 GJA4P35212 333 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 CXCL12P48061 93 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 SLC5A3P53794 718 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 SATB1Q01826 763 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 FSTL4Q6MZW2 842 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 Q6ZS52 159 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 FBXL13Q8NEE6 735 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 SCAMP5Q8TAC9 235 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 HNRNPABQ99729 332 aaKnown RBP15.88■□□□□ 0.13
SEC23A-214ENST00000557437 MED10Q9BTT4 135 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 NT5C1AQ9BXI3 368 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.88■□□□□ 0.13
SEC23A-214ENST00000557437 KRT82Q9NSB4 513 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 RAB20Q9NX57 234 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 COQ4Q9Y3A0 265 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 WNT6Q9Y6F9 365 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 FAM186AA6NE01 2351 aa15.88■□□□□ 0.13
SEC23A-214ENST00000557437 ZNF292O60281 2723 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 LEFTY2O00292 366 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 STX10O60499 249 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 GADD45BO75293 160 aaPredicted RBP15.87■□□□□ 0.13
SEC23A-214ENST00000557437 BMP6P22004 513 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 IFNAR2P48551 515 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 MXI1P50539 228 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 AMPD2Q01433 879 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 PPP2R5DQ14738 602 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 CPA6Q8N4T0 437 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 ATRIPQ8WXE1 791 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 ATP2A3Q93084 1043 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 FBXO32Q969P5 355 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 TSG101Q99816 390 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 LINC00597Q9H2U6 94 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 FAM124BQ9H5Z6 455 aaPredicted RBP15.87■□□□□ 0.13
SEC23A-214ENST00000557437 MMRN2Q9H8L6 949 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 FBRSL1Q9HCM7 1045 aaKnown RBP15.87■□□□□ 0.13
SEC23A-214ENST00000557437 FAM49BQ9NUQ9 324 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 MAN1B1Q9UKM7 699 aa15.87■□□□□ 0.13
SEC23A-214ENST00000557437 GVINP1Q7Z2Y8 2422 aa15.86■□□□□ 0.13
SEC23A-214ENST00000557437 TRIM49BA6NDI0 452 aa15.86■□□□□ 0.13
SEC23A-214ENST00000557437 HHLA1C9JL84 531 aa15.86■□□□□ 0.13
SEC23A-214ENST00000557437 K7ESF4 209 aa15.86■□□□□ 0.13
SEC23A-214ENST00000557437 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
SEC23A-214ENST00000557437 TUBP50607 506 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms