RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 BPIFB1Q8TDL5 484 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 FBXO32Q969P5 355 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 TUBGCP2Q9BSJ2 902 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 NAT10Q9H0A0 1025 aaKnown RBP13.21□□□□□ -0.29
SLIRP-209ENST00000557342 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 TRPV5Q9NQA5 729 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 ARHGEF3Q9NR81 526 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 TDP1Q9NUW8 608 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.29
SLIRP-209ENST00000557342 IL37Q9NZH6 218 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 COL4A2P08572 1712 aa13.21□□□□□ -0.3
SLIRP-209ENST00000557342 FAM92AA1XBS5 289 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 ZNF840PA6NDX5 716 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 BEST1O76090 585 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 LETM1O95202 739 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-209ENST00000557342 CKMP06732 381 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 CD19P15391 556 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 HDCP19113 662 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 MFAP3P55082 362 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 MYL5Q02045 173 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 PRKCQQ04759 706 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 FCHO2Q0JRZ9 810 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 STILQ15468 1287 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 KLHL40Q2TBA0 621 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 ARHGAP29Q52LW3 1261 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 SLC44A4Q53GD3 710 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 TCP11X2Q5H9J9 407 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 PHLDB3Q6NSJ2 640 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 CAVIN1Q6NZI2 390 aaKnown RBP13.2□□□□□ -0.3
SLIRP-209ENST00000557342 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 ANKRD52Q8NB46 1076 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 CRACR2AQ9BSW2 395 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 UBE2TQ9NPD8 197 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-209ENST00000557342 SAMSN1Q9NSI8 373 aaKnown RBP13.2□□□□□ -0.3
SLIRP-209ENST00000557342 HESX1Q9UBX0 185 aa13.2□□□□□ -0.3
SLIRP-209ENST00000557342 KRBA1A5PL33 1030 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 C2orf78A6NCI8 922 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 STK25O00506 426 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 PRAMEF12O95522 483 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 ABL1P00519 1130 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 ACO1P21399 889 aaKnown RBP13.19□□□□□ -0.3
SLIRP-209ENST00000557342 CLCN5P51795 746 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 BCAT1P54687 386 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 STARD6P59095 220 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 TYRO3Q06418 890 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 MLF2Q15773 248 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-209ENST00000557342 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 SNX30Q5VWJ9 437 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 CC2D1AQ6P1N0 951 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-209ENST00000557342 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-209ENST00000557342 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 ARL14EPQ8N8R7 260 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-209ENST00000557342 RBBP8NLQ8NC74 664 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-209ENST00000557342 ANKRD20A12PQ8NF67 263 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 CSGALNACT1Q8TDX6 532 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 KAT5Q92993 513 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-209ENST00000557342 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 TLR8Q9NR97 1041 aaKnown RBP13.19□□□□□ -0.3
SLIRP-209ENST00000557342 APEX2Q9UBZ4 518 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 HCN4Q9Y3Q4 1203 aa13.19□□□□□ -0.3
SLIRP-209ENST00000557342 HHLA1C9JL84 531 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
SLIRP-209ENST00000557342 PDGFBP01127 241 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-209ENST00000557342 GLULP15104 373 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 TCF3P15923 654 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 SLC9A1P19634 815 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 PON1P27169 355 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 TUBP50607 506 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 MLLT6P55198 1093 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-209ENST00000557342 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
SLIRP-209ENST00000557342 CNGA2Q16280 664 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 GOLGA7BQ2TAP0 167 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 MIIPQ5JXC2 388 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 HECTD3Q5T447 861 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 CDKAL1Q5VV42 579 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-209ENST00000557342 FLCNQ8NFG4 579 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 MSANTD3Q96H12 275 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 KREMEN1Q96MU8 473 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 SMG9Q9H0W8 520 aaKnown RBP13.18□□□□□ -0.3
SLIRP-209ENST00000557342 KCNH6Q9H252 994 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 TBC1D17Q9HA65 648 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 CHORDC1Q9UHD1 332 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-209ENST00000557342 TSPAN16Q9UKR8 245 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 ARHGAP26Q9UNA1 814 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 CNTN6Q9UQ52 1028 aa13.18□□□□□ -0.3
SLIRP-209ENST00000557342 RNF225M0QZC1 329 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-209ENST00000557342 O00370 1275 aa13.17□□□□□ -0.3
SLIRP-209ENST00000557342 MAN2B1O00754 1011 aa13.17□□□□□ -0.3
SLIRP-209ENST00000557342 XPO1O14980 1071 aaKnown RBP13.17□□□□□ -0.3
SLIRP-209ENST00000557342 OLFM2O95897 454 aa13.17□□□□□ -0.3
SLIRP-209ENST00000557342 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms