RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 FAM35AQ86V20 835 aa15.07■□□□□ 0
SNX6-210ENST00000557341 PDZD8Q8NEN9 1154 aa15.07■□□□□ 0
SNX6-210ENST00000557341 CD101Q93033 1021 aa15.07■□□□□ 0
SNX6-210ENST00000557341 TNIP3Q96KP6 325 aa15.07■□□□□ 0
SNX6-210ENST00000557341 B3GNT5Q9BYG0 378 aa15.07■□□□□ 0
SNX6-210ENST00000557341 PARD6AQ9NPB6 346 aa15.07■□□□□ 0
SNX6-210ENST00000557341 TMEM30AQ9NV96 361 aa15.07■□□□□ 0
SNX6-210ENST00000557341 CDV3Q9UKY7 258 aaKnown RBP15.07■□□□□ 0
SNX6-210ENST00000557341 SLC8A2Q9UPR5 921 aa15.07■□□□□ 0
SNX6-210ENST00000557341 FRMD4BQ9Y2L6 1034 aa15.07■□□□□ 0
SNX6-210ENST00000557341 ATP6V1DQ9Y5K8 247 aa15.07■□□□□ 0
SNX6-210ENST00000557341 CEP192Q8TEP8 1941 aa15.06■□□□□ 0
SNX6-210ENST00000557341 THADAQ6YHU6 1953 aa15.06■□□□□ 0
SNX6-210ENST00000557341 CCDC163A0A0D9SF12 145 aa15.06■□□□□ 0
SNX6-210ENST00000557341 PRR5-ARHGAP8B1AHC4 643 aa15.06■□□□□ 0
SNX6-210ENST00000557341 LEFTY2O00292 366 aa15.06■□□□□ 0
SNX6-210ENST00000557341 CALUO43852 315 aaPredicted RBP15.06■□□□□ 0
SNX6-210ENST00000557341 RTN3O95197 1032 aaPredicted RBP15.06■□□□□ 0
SNX6-210ENST00000557341 VNN1O95497 513 aa15.06■□□□□ 0
SNX6-210ENST00000557341 ABL1P00519 1130 aa15.06■□□□□ 0
SNX6-210ENST00000557341 OAS1P00973 400 aaKnown RBP15.06■□□□□ 0
SNX6-210ENST00000557341 C4BPAP04003 597 aaKnown RBP15.06■□□□□ 0
SNX6-210ENST00000557341 RPN1P04843 607 aaKnown RBP15.06■□□□□ 0
SNX6-210ENST00000557341 GALK1P51570 392 aa15.06■□□□□ 0
SNX6-210ENST00000557341 NDUFA8P51970 172 aa15.06■□□□□ 0
SNX6-210ENST00000557341 CDH8P55286 799 aa15.06■□□□□ 0
SNX6-210ENST00000557341 DLG4P78352 724 aa15.06■□□□□ 0
SNX6-210ENST00000557341 SLC7A9P82251 487 aa15.06■□□□□ 0
SNX6-210ENST00000557341 ARHGAP8P85298 464 aa15.06■□□□□ 0
SNX6-210ENST00000557341 SPEM2Q0P670 501 aa15.06■□□□□ 0
SNX6-210ENST00000557341 TAF10Q12962 218 aa15.06■□□□□ 0
SNX6-210ENST00000557341 ZACNQ401N2 412 aa15.06■□□□□ 0
SNX6-210ENST00000557341 CEP135Q66GS9 1140 aa15.06■□□□□ 0
SNX6-210ENST00000557341 NAIF1Q69YI7 327 aaPredicted RBP15.06■□□□□ 0
SNX6-210ENST00000557341 CEP68Q76N32 757 aa15.06■□□□□ 0
SNX6-210ENST00000557341 NUP93Q8N1F7 819 aa15.06■□□□□ 0
SNX6-210ENST00000557341 KIAA1958Q8N8K9 716 aa15.06■□□□□ 0
SNX6-210ENST00000557341 TMC2Q8TDI7 906 aa15.06■□□□□ 0
SNX6-210ENST00000557341 SMARCD1Q96GM5 515 aa15.06■□□□□ 0
SNX6-210ENST00000557341 MED10Q9BTT4 135 aa15.06■□□□□ 0
SNX6-210ENST00000557341 FBRSL1Q9HCM7 1045 aaKnown RBP15.06■□□□□ 0
SNX6-210ENST00000557341 DMAP1Q9NPF5 467 aaPredicted RBP15.06■□□□□ 0
SNX6-210ENST00000557341 CPQQ9Y646 472 aa15.06■□□□□ 0
SNX6-210ENST00000557341 FAM237AA0A1B0GTK4 181 aa15.05■□□□□ -0
SNX6-210ENST00000557341 RHOBTB3O94955 611 aa15.05■□□□□ -0
SNX6-210ENST00000557341 PRR29P0C7W0 189 aa15.05■□□□□ -0
SNX6-210ENST00000557341 TGM1P22735 817 aa15.05■□□□□ -0
SNX6-210ENST00000557341 YWHAQP27348 245 aa15.05■□□□□ -0
SNX6-210ENST00000557341 PIK3CAP42336 1068 aa15.05■□□□□ -0
SNX6-210ENST00000557341 ZXDBP98169 803 aa15.05■□□□□ -0
SNX6-210ENST00000557341 SGSM1Q2NKQ1 1148 aa15.05■□□□□ -0
SNX6-210ENST00000557341 DDX42Q86XP3 938 aaKnown RBP eCLIP15.05■□□□□ -0
SNX6-210ENST00000557341 RPLP0P6Q8NHW5 317 aa15.05■□□□□ -0
SNX6-210ENST00000557341 GAB3Q8WWW8 586 aa15.05■□□□□ -0
SNX6-210ENST00000557341 OVCA2Q8WZ82 227 aa15.05■□□□□ -0
SNX6-210ENST00000557341 FBXO32Q969P5 355 aa15.05■□□□□ -0
SNX6-210ENST00000557341 ACDQ96AP0 544 aa15.05■□□□□ -0
SNX6-210ENST00000557341 CHAMP1Q96JM3 812 aa15.05■□□□□ -0
SNX6-210ENST00000557341 SCAND2PQ9GZW5 306 aaPredicted RBP15.05■□□□□ -0
SNX6-210ENST00000557341 SDCBP2Q9H190 292 aa15.05■□□□□ -0
SNX6-210ENST00000557341 TRAF3IP3Q9Y228 551 aa15.05■□□□□ -0
SNX6-210ENST00000557341 ZDHHC9Q9Y397 364 aa15.05■□□□□ -0
SNX6-210ENST00000557341 TNRC6BQ9UPQ9 1833 aaKnown RBP15.05■□□□□ -0
SNX6-210ENST00000557341 MYO18AQ92614 2054 aaKnown RBP15.04■□□□□ -0
SNX6-210ENST00000557341 SLC9A3R1O14745 358 aaPredicted RBP15.04■□□□□ -0
SNX6-210ENST00000557341 IKBKBO14920 756 aa15.04■□□□□ -0
SNX6-210ENST00000557341 MAPK13O15264 365 aa15.04■□□□□ -0
SNX6-210ENST00000557341 RPP40O75818 363 aaKnown RBP15.04■□□□□ -0
SNX6-210ENST00000557341 TRIM21P19474 475 aaKnown RBP15.04■□□□□ -0
SNX6-210ENST00000557341 NR2F2P24468 414 aa15.04■□□□□ -0
SNX6-210ENST00000557341 HOXC13P31276 330 aa15.04■□□□□ -0
SNX6-210ENST00000557341 PXNP49023 591 aaPredicted RBP15.04■□□□□ -0
SNX6-210ENST00000557341 SLC5A3P53794 718 aa15.04■□□□□ -0
SNX6-210ENST00000557341 SV2AQ7L0J3 742 aa15.04■□□□□ -0
SNX6-210ENST00000557341 FILIP1Q7Z7B0 1213 aa15.04■□□□□ -0
SNX6-210ENST00000557341 CAMKK1Q8N5S9 505 aa15.04■□□□□ -0
SNX6-210ENST00000557341 FAM160A2Q8N612 972 aaPredicted RBP15.04■□□□□ -0
SNX6-210ENST00000557341 CCDC26Q8TAB7 109 aa15.04■□□□□ -0
SNX6-210ENST00000557341 TAF4BQ92750 862 aa15.04■□□□□ -0
SNX6-210ENST00000557341 ELMO3Q96BJ8 720 aa15.04■□□□□ -0
SNX6-210ENST00000557341 IMPG2Q9BZV3 1241 aa15.04■□□□□ -0
SNX6-210ENST00000557341 RNF38Q9H0F5 515 aa15.04■□□□□ -0
SNX6-210ENST00000557341 KRT82Q9NSB4 513 aa15.04■□□□□ -0
SNX6-210ENST00000557341 SMPD4Q9NXE4 827 aa15.04■□□□□ -0
SNX6-210ENST00000557341 SDK1Q7Z5N4 2213 aa15.04■□□□□ -0
SNX6-210ENST00000557341 A0A1W2PQ27 194 aa15.03■□□□□ -0
SNX6-210ENST00000557341 A0A1W2PQ64 194 aa15.03■□□□□ -0
SNX6-210ENST00000557341 A0A1W2PQD8 194 aa15.03■□□□□ -0
SNX6-210ENST00000557341 AP1G2O75843 785 aa15.03■□□□□ -0
SNX6-210ENST00000557341 ASS1P00966 412 aaKnown RBP15.03■□□□□ -0
SNX6-210ENST00000557341 CYP17A1P05093 508 aa15.03■□□□□ -0
SNX6-210ENST00000557341 CCDC192P0DO97 292 aa15.03■□□□□ -0
SNX6-210ENST00000557341 MBL2P11226 248 aaPredicted RBP15.03■□□□□ -0
SNX6-210ENST00000557341 ASPAP45381 313 aa15.03■□□□□ -0
SNX6-210ENST00000557341 VAMP7P51809 220 aa15.03■□□□□ -0
SNX6-210ENST00000557341 DPYDQ12882 1025 aa15.03■□□□□ -0
SNX6-210ENST00000557341 NFIL3Q16649 462 aa15.03■□□□□ -0
SNX6-210ENST00000557341 INTS8Q75QN2 995 aaKnown RBP15.03■□□□□ -0
SNX6-210ENST00000557341 SYT13Q7L8C5 426 aa15.03■□□□□ -0
SNX6-210ENST00000557341 ACOT1Q86TX2 421 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms