RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ARSAP15289 507 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 PFKLP17858 780 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 KPNA1P52294 538 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-224ENST00000556737 SLC5A3P53794 718 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 FKBP3Q00688 224 aaKnown RBP10.96□□□□□ -0.65
SHMT2-224ENST00000556737 MTAPQ13126 283 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 MORC3Q14149 939 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 GAS6Q14393 721 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 ITPRIPL2Q3MIP1 535 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 ISM2Q6H9L7 571 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 TTI2Q6NXR4 508 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 RALGPS2Q86X27 583 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-224ENST00000556737 NUP93Q8N1F7 819 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 C12orf29Q8N999 325 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 SLC2A14Q8TDB8 520 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 SH3RF2Q8TEC5 729 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 SLC35C1Q96A29 364 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 TSG101Q99816 390 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 ARID3AQ99856 593 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 DUSP9Q99956 384 aaKnown RBP10.96□□□□□ -0.65
SHMT2-224ENST00000556737 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.65
SHMT2-224ENST00000556737 IMPG2Q9BZV3 1241 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 CYP3A43Q9HB55 503 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 DMAP1Q9NPF5 467 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-224ENST00000556737 GKN1Q9NS71 199 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 SPATA6Q9NWH7 488 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-224ENST00000556737 IL37Q9NZH6 218 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 HOOK1Q9UJC3 728 aaKnown RBP10.96□□□□□ -0.65
SHMT2-224ENST00000556737 FBXO4Q9UKT5 387 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 ZFHX2Q9C0A1 2572 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-224ENST00000556737 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 HHLA1C9JL84 531 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 PSMA7O14818 248 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 LAMTOR5O43504 91 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 AP1G2O75843 785 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 RTN3O95197 1032 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-224ENST00000556737 CD58P19256 250 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 PPP3CCP48454 512 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 IFRD2Q12894 506 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-224ENST00000556737 TAF10Q12962 218 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 CCINQ13939 588 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 ZNF528Q3MIS6 628 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 DCAF17Q5H9S7 520 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-224ENST00000556737 NAIF1Q69YI7 327 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-224ENST00000556737 C1orf228Q6PIY5 440 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 FOXR2Q6PJQ5 311 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 Q6ZS52 159 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 CLEC20AQ6ZU45 233 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 GPRIN1Q7Z2K8 1008 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 FBXL13Q8NEE6 735 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 SCAMP5Q8TAC9 235 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 NELL1Q92832 810 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 FAXDC2Q96IV6 333 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
SHMT2-224ENST00000556737 IER2Q9BTL4 223 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 ANP32EQ9BTT0 268 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 MED10Q9BTT4 135 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 NUP62CLQ9H1M0 184 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 EBF3Q9H4W6 596 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 RBM12Q9NTZ6 932 aaKnown RBP10.95□□□□□ -0.66
SHMT2-224ENST00000556737 THG1LQ9NWX6 298 aaKnown RBP10.95□□□□□ -0.66
SHMT2-224ENST00000556737 RAB20Q9NX57 234 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 EHD2Q9NZN4 543 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 TRPM5Q9NZQ8 1165 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 COQ4Q9Y3A0 265 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 R4GN57 208 aa10.95□□□□□ -0.66
SHMT2-224ENST00000556737 MYH10P35580 1976 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 LEFTY2O00292 366 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 NCAM2O15394 837 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 STX10O60499 249 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 ZDHHC11BP0C7U3 371 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 HDCP19113 662 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 YWHAQP27348 245 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 ADORA2BP29275 332 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 PPP1R2P41236 205 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 PGFP49763 221 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 MAP3K7CLP57077 242 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 SLC7A9P82251 487 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 RUNX3Q13761 415 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 PON2Q15165 354 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 PDGFRLQ15198 375 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 EML3Q32P44 896 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 CCDC183Q5T5S1 534 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 TCERG1LQ5VWI1 586 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 SNX30Q5VWJ9 437 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 PDZD8Q8NEN9 1154 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 OSCP1Q8WVF1 389 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 OVCA2Q8WZ82 227 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 FBXO32Q969P5 355 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 DHTKD1Q96HY7 919 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-224ENST00000556737 CEP63Q96MT8 703 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 SLITRK1Q96PX8 696 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 HNRNPABQ99729 332 aaKnown RBP10.94□□□□□ -0.66
SHMT2-224ENST00000556737 NT5C1AQ9BXI3 368 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 LMAN1LQ9HAT1 526 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 CISHQ9NSE2 258 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 GMIPQ9P107 970 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 ARMCX3Q9UH62 379 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms