RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 GTSE1Q9NYZ3 720 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 TRPM5Q9NZQ8 1165 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 GMIPQ9P107 970 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 GCNT4Q9P109 453 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 NDRG2Q9UN36 371 aaKnown RBP10.99□□□□□ -0.65
SNX6-208ENST00000556712 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.99□□□□□ -0.65
SNX6-208ENST00000556712 ZNF840PA6NDX5 716 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 HHLA1C9JL84 531 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 H0Y858 1186 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 SCAMP3O14828 347 aaKnown RBP10.98□□□□□ -0.65
SNX6-208ENST00000556712 RTN3O95197 1032 aaPredicted RBP10.98□□□□□ -0.65
SNX6-208ENST00000556712 GNA14O95837 355 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 CALCAP01258 141 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 AFPP02771 609 aaKnown RBP10.98□□□□□ -0.65
SNX6-208ENST00000556712 USP17L7P0C7H9 530 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 ARSAP15289 507 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 TRIM21P19474 475 aaKnown RBP10.98□□□□□ -0.65
SNX6-208ENST00000556712 PLA2G5P39877 138 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 PGFP49763 221 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 MARSP56192 900 aaKnown RBP10.98□□□□□ -0.65
SNX6-208ENST00000556712 ZXDBP98169 803 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 GOLGA7BQ2TAP0 167 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 ARHGAP29Q52LW3 1261 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 TXNDC11Q6PKC3 985 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 DTWD2Q8NBA8 298 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 LMO3Q8TAP4 145 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 CSGALNACT1Q8TDX6 532 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 SH3RF2Q8TEC5 729 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 TMEM176AQ96HP8 235 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 SHDQ96IW2 340 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 HEXIM2Q96MH2 286 aaKnown RBP10.98□□□□□ -0.65
SNX6-208ENST00000556712 SLITRK1Q96PX8 696 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 PHOX2BQ99453 314 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 HNRNPABQ99729 332 aaKnown RBP10.98□□□□□ -0.65
SNX6-208ENST00000556712 RNF38Q9H0F5 515 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 EBF3Q9H4W6 596 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 KIF9Q9HAQ2 790 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 CSNK1G1Q9HCP0 422 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 HPS4Q9NQG7 708 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 SMPD4Q9NXE4 827 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 DLGAP2Q9P1A6 1054 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 CHORDC1Q9UHD1 332 aaPredicted RBP10.98□□□□□ -0.65
SNX6-208ENST00000556712 ZMYM5Q9UJ78 669 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 SIT1Q9Y3P8 196 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 CPQQ9Y646 472 aa10.98□□□□□ -0.65
SNX6-208ENST00000556712 FAM170BA6NMN3 283 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 CYP26A1O43174 497 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 ABCB7O75027 752 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 OAS1P00973 400 aaKnown RBP10.97□□□□□ -0.65
SNX6-208ENST00000556712 CCDC192P0DO97 292 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 CD19P15391 556 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 HDCP19113 662 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 KPNA1P52294 538 aaPredicted RBP10.97□□□□□ -0.65
SNX6-208ENST00000556712 PTPN5P54829 565 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 APBA1Q02410 837 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 NHLH1Q02575 133 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 ZNF268Q14587 947 aaPredicted RBP10.97□□□□□ -0.65
SNX6-208ENST00000556712 MTF1Q14872 753 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 TPD52L1Q16890 204 aaPredicted RBP10.97□□□□□ -0.65
SNX6-208ENST00000556712 ZNF852Q6ZMS4 543 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 RRAGAQ7L523 313 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 IRF2BP1Q8IU81 584 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 PPM1KQ8N3J5 372 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 MLKLQ8NB16 471 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 FAM122AQ96E09 287 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 NT5C1BQ96P26 610 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 INTS2Q9H0H0 1204 aaKnown RBP10.97□□□□□ -0.65
SNX6-208ENST00000556712 KCNH6Q9H252 994 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 CCSER2Q9H7U1 834 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 TRPV5Q9NQA5 729 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 GKN1Q9NS71 199 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 EHD2Q9NZN4 543 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 WNT6Q9Y6F9 365 aa10.97□□□□□ -0.65
SNX6-208ENST00000556712 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 OTOL1A6NHN0 477 aaPredicted RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 SOBPA7XYQ1 873 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 SPECC1L-ADORA2AF8WAN1 911 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 GOLGA6L22H0YM25 854 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 LEFTY2O00292 366 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 PMM2O15305 246 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 P4HA2O15460 535 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 COCHO43405 550 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 FGFR1OPO95684 399 aaKnown RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 OLFM2O95897 454 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 MBL2P11226 248 aaPredicted RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 ACO1P21399 889 aaKnown RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 TBXAS1P24557 533 aaPredicted RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 CTHP32929 405 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 MTIF2P46199 727 aaKnown RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 YWHAEP62258 255 aaKnown RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 PLCB2Q00722 1185 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 ANGPT1Q15389 498 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 ARHGAP17Q68EM7 881 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 NAIF1Q69YI7 327 aaPredicted RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 GJB7Q6PEY0 223 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 TMEM270Q6UE05 265 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 TTC30AQ86WT1 665 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 ZNF687Q8N1G0 1237 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 PDZD8Q8NEN9 1154 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 FAM3CQ92520 227 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms