RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CDH6P55285 790 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 SF3A3Q12874 501 aaKnown RBP eCLIP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 DPYSL3Q14195 570 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 CA9Q16790 459 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 ZC3H12AQ5D1E8 599 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 APBB1IPQ7Z5R6 666 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 OSTM1Q86WC4 334 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 CCDC13Q8IYE1 715 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 C7orf31Q8N865 590 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 MGARPQ8TDB4 240 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 LRRN4Q8WUT4 740 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 SLC35F5Q8WV83 523 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 WNT8BQ93098 351 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 APBA2Q99767 749 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 WDR83Q9BRX9 315 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 MAGEB5Q9BZ81 275 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 AP5M1Q9H0R1 490 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 TBK1Q9UHD2 729 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 KIAA1257Q9ULG3 409 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 UBQLN1Q9UMX0 589 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 IPPQ9Y573 584 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 FAM169AQ9Y6X4 670 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 DPYSL4O14531 572 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 IGHA2P01877 340 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 GCAP28676 217 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 PCK1P35558 622 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 CTCFP49711 727 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 CPT1AP50416 773 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 EIF3EP60228 445 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 PURAQ00577 322 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 SLC6A3Q01959 620 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 FSCN1Q16658 493 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 FBXO47Q5MNV8 452 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 SCYL2Q6P3W7 929 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 C1orf228Q6PIY5 440 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 VSTM1Q6UX27 236 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 FAM228AQ86W67 206 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 IFNL1Q8IU54 200 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 RELL1Q8IUW5 271 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 FAM71DQ8N9W8 422 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 FAM172AQ8WUF8 416 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 NDRG1Q92597 394 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 ARHGEF2Q92974 986 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 SERPINB12Q96P63 405 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 ROPN1BQ9BZX4 212 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 ROPN1Q9HAT0 212 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 MLXIPLQ9NP71 852 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 NGRNQ9NPE2 291 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 EFR3BQ9Y2G0 817 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 FARP1Q9Y4F1 1045 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 PCNTO95613 3336 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-211ENST00000556648 SRRM3A6NNA2 597 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-211ENST00000556648 KPNA7A9QM74 516 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 PTGESO14684 152 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 ATP2C2O75185 946 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 TMEM63AO94886 807 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 ENDOD1O94919 500 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 MAP3K6O95382 1288 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 LCP1P13796 627 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 RGS2P41220 211 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 IFNAR2P48551 515 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 MORF4L2Q15014 288 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 LRRC14Q15048 493 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 MSS51Q4VC12 460 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 XKR4Q5GH76 650 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 FNBP1LQ5T0N5 605 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 ARHGAP17Q68EM7 881 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 TMEM110Q86TL2 294 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 ZC3H18Q86VM9 953 aaKnown RBP10.59□□□□□ -0.71
TMEM260-211ENST00000556648 ANKMY2Q8IV38 441 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 C10orf67Q8IYJ2 551 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 TTC39CQ8N584 583 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 CCHCR1Q8TD31 782 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 CPT1BQ92523 772 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 PKNOX2Q96KN3 472 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 ZFP42Q96MM3 310 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 PRMT1Q99873 361 aaKnown RBP10.59□□□□□ -0.71
TMEM260-211ENST00000556648 SNRNP25Q9BV90 132 aaKnown RBP10.59□□□□□ -0.71
TMEM260-211ENST00000556648 ARHGAP39Q9C0H5 1083 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 TSPYL1Q9H0U9 437 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 EURLQ9NYK6 297 aa10.59□□□□□ -0.71
TMEM260-211ENST00000556648 DDX20Q9UHI6 824 aaKnown RBP10.59□□□□□ -0.71
TMEM260-211ENST00000556648 APOC4-APOC2K7ER74 178 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 TNPO2O14787 897 aaKnown RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 PRPSAP2O60256 369 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 APOC2P02655 101 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 KCNE1P15382 129 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 IL4RP24394 825 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 ACAT1P24752 427 aaKnown RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 AXLP30530 894 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 HOXC8P31273 242 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 RABGGTBP53611 331 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CRYBB1P53674 252 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 HDAC4P56524 1084 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CORO7P57737 925 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CDC42EP1Q00587 391 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 MPP2Q14168 576 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 KRT81Q14533 505 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms