RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 DMXL1Q9Y485 3027 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 LRP3O75074 770 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 VNN1O95497 513 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 NFATC1O95644 943 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 NR3C1P04150 777 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 MYL1P05976 194 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 YWHAQP27348 245 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 DLG4P78352 724 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 KRT85P78386 507 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 SLC7A9P82251 487 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 SCARA5Q6ZMJ2 495 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 NUP93Q8N1F7 819 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 FAM160A2Q8N612 972 aaPredicted RBP24.03■■□□□ 1.44
ACTN1-220ENST00000556433 TMEM174Q8WUU8 243 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 MED10Q9BTT4 135 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 HPSEQ9Y251 543 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 CPQQ9Y646 472 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 GREB1Q4ZG55 1949 aa24.03■■□□□ 1.44
ACTN1-220ENST00000556433 CCDC163A0A0D9SF12 145 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 CAMKK1Q8N5S9 505 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 RPLP0P6Q8NHW5 317 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 GAB3Q8WWW8 586 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 EZH1Q92800 747 aaPredicted RBP24.02■■□□□ 1.44
ACTN1-220ENST00000556433 TNIP3Q96KP6 325 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 KCNK16Q96T55 309 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 SEMA4GQ9NTN9 838 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 SMPD4Q9NXE4 827 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 ZDHHC9Q9Y397 364 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.02■■□□□ 1.44
ACTN1-220ENST00000556433 ATP8B3O60423 1300 aa24.02■■□□□ 1.44
ACTN1-220ENST00000556433 RPP40O75818 363 aaKnown RBP24.01■■□□□ 1.43
ACTN1-220ENST00000556433 RTN3O95197 1032 aaPredicted RBP24.01■■□□□ 1.43
ACTN1-220ENST00000556433 OLFM2O95897 454 aa24.01■■□□□ 1.43
ACTN1-220ENST00000556433 OAS1P00973 400 aaKnown RBP24.01■■□□□ 1.43
ACTN1-220ENST00000556433 RPN1P04843 607 aaKnown RBP24.01■■□□□ 1.43
ACTN1-220ENST00000556433 SYKP43405 635 aa24.01■■□□□ 1.43
ACTN1-220ENST00000556433 SGSM1Q2NKQ1 1148 aa24.01■■□□□ 1.43
ACTN1-220ENST00000556433 CEP135Q66GS9 1140 aa24.01■■□□□ 1.43
ACTN1-220ENST00000556433 SDCBP2Q9H190 292 aa24.01■■□□□ 1.43
ACTN1-220ENST00000556433 FRMD4BQ9Y2L6 1034 aa24.01■■□□□ 1.43
ACTN1-220ENST00000556433 PTPRDP23468 1912 aa24.01■■□□□ 1.43
ACTN1-220ENST00000556433 SDK1Q7Z5N4 2213 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 CALUO43852 315 aaPredicted RBP24■■□□□ 1.43
ACTN1-220ENST00000556433 CCDC192P0DO97 292 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 MBL2P11226 248 aaPredicted RBP24■■□□□ 1.43
ACTN1-220ENST00000556433 P4HA1P13674 534 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 CSRP2Q16527 193 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 ZACNQ401N2 412 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 PAQR9Q6ZVX9 377 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 CACNA2D4Q7Z3S7 1137 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 FILIP1Q7Z7B0 1213 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 ACOT1Q86TX2 421 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 FAM35AQ86V20 835 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 ADGRG2Q8IZP9 1017 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 TMC2Q8TDI7 906 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 FBXO32Q969P5 355 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 CCDC47Q96A33 483 aaKnown RBP24■■□□□ 1.43
ACTN1-220ENST00000556433 HHIPQ96QV1 700 aa24■■□□□ 1.43
ACTN1-220ENST00000556433 CHORDC1Q9UHD1 332 aaPredicted RBP24■■□□□ 1.43
ACTN1-220ENST00000556433 SLC9A3R1O14745 358 aaPredicted RBP23.99■■□□□ 1.43
ACTN1-220ENST00000556433 AXIN1O15169 862 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 NDUFA8P51970 172 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 SV2AQ7L0J3 742 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 SYT13Q7L8C5 426 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 KIAA1958Q8N8K9 716 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 PDZD8Q8NEN9 1154 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 CCDC26Q8TAB7 109 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 SCAMP5Q8TAC9 235 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 RTKNQ9BST9 563 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 CFAP97Q9P2B7 532 aa23.99■■□□□ 1.43
ACTN1-220ENST00000556433 SCAMP3O14828 347 aaKnown RBP23.98■■□□□ 1.43
ACTN1-220ENST00000556433 IKBKBO14920 756 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 KIF20AO95235 890 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 PRR29P0C7W0 189 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 OPRD1P41143 372 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 DMC1Q14565 340 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 PRR23CQ6ZRP0 262 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 KBTBD6Q86V97 674 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 OVCA2Q8WZ82 227 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 TAF4BQ92750 862 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 ACDQ96AP0 544 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 SMARCD1Q96GM5 515 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 DMAP1Q9NPF5 467 aaPredicted RBP23.98■■□□□ 1.43
ACTN1-220ENST00000556433 TRAF3IP3Q9Y228 551 aa23.98■■□□□ 1.43
ACTN1-220ENST00000556433 FAM237AA0A1B0GTK4 181 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.97■■□□□ 1.43
ACTN1-220ENST00000556433 DCDC2BA2VCK2 349 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 TNFRSF10BO14763 440 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 AP1G2O75843 785 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 CYP17A1P05093 508 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 ORC1Q13415 861 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 DHCR24Q15392 516 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 HECTD3Q5T447 861 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 DDX42Q86XP3 938 aaKnown RBP eCLIP23.97■■□□□ 1.43
ACTN1-220ENST00000556433 FUKQ8N0W3 1084 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 MAPK8IP1Q9UQF2 711 aa23.97■■□□□ 1.43
ACTN1-220ENST00000556433 RHOBTB3O94955 611 aa23.96■■□□□ 1.43
ACTN1-220ENST00000556433 APBB3O95704 486 aa23.96■■□□□ 1.43
ACTN1-220ENST00000556433 HLA-DRAP01903 254 aa23.96■■□□□ 1.43
ACTN1-220ENST00000556433 VAMP7P51809 220 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms