RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 GTSE1Q9NYZ3 720 aa15.89■□□□□ 0.13
LRP1-211ENST00000556356 NEU2Q9Y3R4 380 aa15.89■□□□□ 0.13
LRP1-211ENST00000556356 ZNF197O14709 1029 aa15.89■□□□□ 0.13
LRP1-211ENST00000556356 ZNF263O14978 683 aa15.89■□□□□ 0.13
LRP1-211ENST00000556356 ESRRBO95718 433 aa15.89■□□□□ 0.13
LRP1-211ENST00000556356 SLC9A9Q8IVB4 645 aa15.89■□□□□ 0.13
LRP1-211ENST00000556356 TSPAN17Q96FV3 270 aa15.89■□□□□ 0.13
LRP1-211ENST00000556356 LRRC1Q9BTT6 524 aa15.89■□□□□ 0.13
LRP1-211ENST00000556356 KCNT1Q5JUK3 1230 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 SH2D4BQ5SQS7 431 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 LRGUKQ96M69 825 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 UBXN6Q9BZV1 441 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 CIPCQ9C0C6 399 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 PCDHA2Q9Y5H9 948 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 ADRB2P07550 413 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 HIST1H2AGP0C0S8 130 aaPredicted RBP15.88■□□□□ 0.13
LRP1-211ENST00000556356 HIST1H2ADP20671 130 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 MAP4P27816 1152 aaKnown RBP15.88■□□□□ 0.13
LRP1-211ENST00000556356 DBN1Q16643 649 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 IMPG1Q17R60 797 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 FASTKD1Q53R41 847 aaKnown RBP15.88■□□□□ 0.13
LRP1-211ENST00000556356 LRRC8DQ7L1W4 858 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 MCOLN2Q8IZK6 566 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.88■□□□□ 0.13
LRP1-211ENST00000556356 VCPIP1Q96JH7 1222 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 HIST1H2AHQ96KK5 128 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 HIST1H2AJQ99878 128 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 H2AFJQ9BTM1 129 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 NIFKQ9BYG3 293 aaKnown RBP15.88■□□□□ 0.13
LRP1-211ENST00000556356 VCX3BQ9H321 246 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 NSMCE4AQ9NXX6 385 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 G3BP2Q9UN86 482 aaKnown RBP15.88■□□□□ 0.13
LRP1-211ENST00000556356 PLA2G4CQ9UP65 541 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 STK38LQ9Y2H1 464 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 CCDC78A2IDD5 438 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 PDAP1Q13442 181 aaKnown RBP15.88■□□□□ 0.13
LRP1-211ENST00000556356 TFDP3Q5H9I0 405 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 EEF1DP3Q658K8 133 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 JAMLQ86YT9 394 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 AIPL1Q9NZN9 384 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 SUN2Q9UH99 717 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 FBXL5Q9UKA1 691 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 CDH9Q9ULB4 789 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 ALS2Q96Q42 1657 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 TREHO43280 583 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 TMCC1O94876 653 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 CCDC130P13994 396 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 ARF4P18085 180 aaPredicted RBP15.88■□□□□ 0.13
LRP1-211ENST00000556356 CBWD6Q4V339 395 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 CBWD3Q5JTY5 395 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 CBWD5Q5RIA9 395 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 MAML1Q92585 1016 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 ATXN7L3BQ96GX2 97 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 FRMD8Q9BZ67 464 aaPredicted RBP15.88■□□□□ 0.13
LRP1-211ENST00000556356 SMPD4Q9NXE4 827 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 SRRDQ9UH36 339 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 ASTN1O14525 1302 aa15.88■□□□□ 0.13
LRP1-211ENST00000556356 A0A0A6YYK5 440 aaPredicted RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 NOL3O60936 208 aaKnown RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 ADH1AP07327 375 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 NCF2P19878 526 aaPredicted RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 MCL1Q07820 350 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 FAM96AQ9H5X1 160 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 SMYD3Q9H7B4 428 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 STX7O15400 261 aaKnown RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 PMPCBO75439 489 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 POLBP06746 335 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 MDM2Q00987 491 aaPredicted RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 PPP3CAQ08209 521 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 PPIGQ13427 754 aaKnown RBP eCLIP15.87■□□□□ 0.132e-7■■■□□ 16.1
LRP1-211ENST00000556356 DCLK3Q9C098 648 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 DUOX1Q9NRD9 1551 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 RPTORQ8N122 1335 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 SYNCRIPO60506 623 aaKnown RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 GEMIN4P57678 1058 aaKnown RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 SNX19Q92543 992 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 ELMO3Q96BJ8 720 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.87■□□□□ 0.131e-6■■□□□ 12.1
LRP1-211ENST00000556356 SPAG6O75602 509 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 TNFSF9P41273 254 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 RHOAP61586 193 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 ZNF467Q7Z7K2 595 aaPredicted RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 RASAL3Q86YV0 1011 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 XPO6Q96QU8 1125 aaKnown RBP15.87■□□□□ 0.13
LRP1-211ENST00000556356 TBCBQ99426 244 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 ZNF112Q9UJU3 913 aa15.87■□□□□ 0.13
LRP1-211ENST00000556356 CCDC160A6NGH7 325 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 KLRC4O43908 158 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 TTC4O95801 387 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 PREPLQ4J6C6 727 aaPredicted RBP15.86■□□□□ 0.13
LRP1-211ENST00000556356 CFAP61Q8NHU2 1237 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 PACSIN1Q9BY11 444 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 MAFBQ9Y5Q3 323 aaPredicted RBP15.86■□□□□ 0.13
LRP1-211ENST00000556356 FGBP02675 491 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 COILP38432 576 aaPredicted RBP15.86■□□□□ 0.13
LRP1-211ENST00000556356 FBXO38Q6PIJ6 1188 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 SLC24A5Q71RS6 500 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 GLIS3Q8NEA6 775 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 SLC13A1Q9BZW2 595 aa15.86■□□□□ 0.13
LRP1-211ENST00000556356 C20orf96Q9NUD7 363 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms