RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TMEM105Q8N8V8 129 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 MAB21L3Q8N8X9 362 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 SLC2A14Q8TDB8 520 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 SHDQ96IW2 340 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 PRRX2Q99811 253 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 ARID3AQ99856 593 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 SRRTQ9BXP5 876 aaKnown RBP12.24□□□□□ -0.45
SLIRP-205ENST00000556310 TRPV5Q9NQA5 729 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 CISHQ9NSE2 258 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 FAM49BQ9NUQ9 324 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 TRAV19A0A0A6YYK7 116 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 ARNTLO00327 626 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 ZNF263O14978 683 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 CHADO15335 359 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 RTN3O95197 1032 aaPredicted RBP12.23□□□□□ -0.45
SLIRP-205ENST00000556310 CCDC192P0DO97 292 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 STARD6P59095 220 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 CETN1Q12798 172 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 CUL2Q13617 745 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 ZNF268Q14587 947 aaPredicted RBP12.23□□□□□ -0.45
SLIRP-205ENST00000556310 ARHGAP29Q52LW3 1261 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 SLC44A4Q53GD3 710 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 YAF2Q8IY57 180 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 NUP93Q8N1F7 819 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 CELF5Q8N6W0 485 aaKnown RBP12.23□□□□□ -0.45
SLIRP-205ENST00000556310 C12orf29Q8N999 325 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 BPIFB1Q8TDL5 484 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 SLITRK1Q96PX8 696 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 HNRNPABQ99729 332 aaKnown RBP12.23□□□□□ -0.45
SLIRP-205ENST00000556310 DDX23Q9BUQ8 820 aaKnown RBP12.23□□□□□ -0.45
SLIRP-205ENST00000556310 SMG9Q9H0W8 520 aaKnown RBP12.23□□□□□ -0.45
SLIRP-205ENST00000556310 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 TRPM5Q9NZQ8 1165 aa12.23□□□□□ -0.45
SLIRP-205ENST00000556310 TNFRSF10BO14763 440 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 AFPP02771 609 aaKnown RBP12.22□□□□□ -0.45
SLIRP-205ENST00000556310 CKMP06732 381 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 USP17L7P0C7H9 530 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 FAM200BP0CF97 657 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 PFKLP17858 780 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 TBXAS1P24557 533 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-205ENST00000556310 PPP3CCP48454 512 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 PDE6CP51160 858 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 SLC5A3P53794 718 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 YWHAEP62258 255 aaKnown RBP12.22□□□□□ -0.45
SLIRP-205ENST00000556310 USP4Q13107 963 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 DPCR1Q3MIW9 517 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 TPRG1Q6ZUI0 275 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 PDZD8Q8NEN9 1154 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 ZMIZ2Q8NF64 920 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 PJA1Q8NG27 643 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 OVCA2Q8WZ82 227 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 USP13Q92995 863 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-205ENST00000556310 TATDN2Q93075 761 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 CYFIP2Q96F07 1278 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
SLIRP-205ENST00000556310 NT5C1BQ96P26 610 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 LRRC3BQ96PB8 259 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 MED15Q96RN5 788 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 SMOQ99835 787 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 TRPC7Q9HCX4 862 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 HEBP1Q9NRV9 189 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 TDP1Q9NUW8 608 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 GCNT4Q9P109 453 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 CCL26Q9Y258 94 aa12.22□□□□□ -0.45
SLIRP-205ENST00000556310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.22□□□□□ -0.45
SLIRP-205ENST00000556310 KANSL1LA0AUZ9 987 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 C2orf78A6NCI8 922 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 ZNF840PA6NDX5 716 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 YWHAQP27348 245 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 ADORA2BP29275 332 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 RAD23BP54727 409 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 IFRD2Q12894 506 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-205ENST00000556310 TAF10Q12962 218 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 ZNF394Q53GI3 561 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-205ENST00000556310 CLEC20AQ6ZU45 233 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 UBR7Q8N806 425 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 SLC4A11Q8NBS3 891 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 PRSS33Q8NF86 280 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 GPT2Q8TD30 523 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 FBXO32Q969P5 355 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 MSANTD3Q96H12 275 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 SLC22A12Q96S37 553 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 OSBPL6Q9BZF3 934 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 FOXQ1Q9C009 403 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 PNPLA8Q9NP80 782 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 LTB4R2Q9NPC1 389 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 THG1LQ9NWX6 298 aaKnown RBP12.21□□□□□ -0.45
SLIRP-205ENST00000556310 COMMD8Q9NX08 183 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 IL37Q9NZH6 218 aa12.21□□□□□ -0.45
SLIRP-205ENST00000556310 FAM92AA1XBS5 289 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 MAN2B1O00754 1011 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 PI15O43692 258 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 BEST1O76090 585 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 OLFM2O95897 454 aa12.2□□□□□ -0.46
SLIRP-205ENST00000556310 MBD3O95983 291 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms