RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FAM163AQ96GL9 167 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 TARS2Q9BW92 718 aaKnown RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 TMEM245Q9H330 911 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 C10orf88Q9H8K7 445 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 POLE3Q9NRF9 147 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 PDP2Q9P2J9 529 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 POLG2Q9UHN1 485 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 DYRK1BQ9Y463 629 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 KIAA1210Q9ULL0 1709 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 F8W810 466 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 UBXN8O00124 270 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 FKBP9O95302 570 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 PGK2P07205 417 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 MYBP10242 640 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 GUCY1A2P33402 732 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 COPAP53621 1224 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 GCNT1Q02742 428 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 KPNB1Q14974 876 aaKnown RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 FKBP9P1Q75LS8 142 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 CDR2LQ86X02 465 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 CEP70Q8NHQ1 597 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 TPCN2Q8NHX9 752 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 C19orf60Q96EN9 201 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 THOC1Q96FV9 657 aaKnown RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 CLPBQ9H078 707 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 RIOX1Q9H6W3 641 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 GJB4Q9NTQ9 266 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 DDIT4Q9NX09 232 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 NCKIPSDQ9NZQ3 722 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 VTI1BQ9UEU0 232 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 PCDHB12Q9Y5F1 795 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 UMODL1Q5DID0 1318 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 AP1G2O75843 785 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 ASS1P00966 412 aaKnown RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 GNRH1P01148 92 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 MPOP05164 745 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 RRM1P23921 792 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 CAMK2GQ13555 558 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 COPS7BQ9H9Q2 264 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 TLR8Q9NR97 1041 aaKnown RBP11.1□□□□□ -0.63
ACTN1-216ENST00000556083 TMCC3Q9ULS5 477 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 AURKCQ9UQB9 309 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 ERCC6L2Q5T890 1561 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 ABCA6Q8N139 1617 aa11.1□□□□□ -0.63
ACTN1-216ENST00000556083 CCDC195A0A1B0GUA6 201 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 SAC3D1A6NKF1 404 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 PHF20L1A8MW92 1017 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 TMEM114B3SHH9 223 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 AKAP10O43572 662 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 GUCY1B2O75343 617 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 PROSCO94903 275 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 WDR47O94967 919 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 IL1R1P14778 569 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 CHN1P15882 459 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 CASP1P29466 404 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 NPY2RP49146 381 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 PEX5P50542 639 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 MAP3K7CLP57077 242 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 CCZ1BP86790 482 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 CCZ1P86791 482 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 DNAJC3Q13217 504 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 CYLC2Q14093 348 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ZCCHC8Q6NZY4 707 aaKnown RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 FBXO32Q969P5 355 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ZNF333Q96JL9 665 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 RPRD1AQ96P16 312 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 MTG1Q9BT17 334 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 NLNQ9BYT8 704 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 KLHL28Q9NXS3 571 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 A0A087WZ62 844 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 QSOX1O00391 747 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 TUFMP49411 452 aaKnown RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 RGS7P49802 495 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 CDK16Q00536 496 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 PDIA6Q15084 440 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ZRANB3Q5FWF4 1079 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 FOXR2Q6PJQ5 311 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ADCK1Q86TW2 530 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 IPMKQ8NFU5 416 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ZNF473Q8WTR7 871 aaKnown RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 DPF2Q92785 391 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ECSITQ9BQ95 431 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 PHACTR1Q9C0D0 580 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 AVENQ9NQS1 362 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 A0A088AWK7 358 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 H0Y3Z8 333 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 KRT6AP02538 564 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ALBP02768 609 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 KRT6BP04259 564 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 TSHRP16473 764 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ZNF10P21506 573 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 FGFR4P22455 802 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 KRT6CP48668 564 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 PRIM2P49643 509 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 CDK7P50613 346 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ITGA8P53708 1063 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ANTXR2P58335 489 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 VSNL1P62760 191 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms