RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MYL4P12829 197 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 LTBRP36941 435 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 GPD2P43304 727 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 GPR15P49685 360 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 PSEN1P49768 467 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 SLC5A3P53794 718 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 EPHA5P54756 1037 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 GSDMDP57764 484 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 DLX2Q07687 328 aaPredicted RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 TBX2Q13207 712 aaPredicted RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 LEXMQ3ZCV2 418 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 PKDCCQ504Y2 493 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 ARHGAP15Q53QZ3 475 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 SDHAF4Q5VUM1 108 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 TAF3Q5VWG9 929 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 DENND1BQ6P3S1 775 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 GRASPQ7Z6J2 395 aaPredicted RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 TTC30AQ86WT1 665 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 PASD1Q8IV76 773 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 ARHGAP18Q8N392 663 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 SMRP1Q8NCR6 262 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 ZMIZ2Q8NF64 920 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 GPR152Q8TDT2 470 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 SLC35F5Q8WV83 523 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 OVCA2Q8WZ82 227 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 MRPS31Q92665 395 aaKnown RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 GOLGA1Q92805 767 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 FBXO32Q969P5 355 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 ZNF707Q96C28 371 aaPredicted RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 DNAJC7Q99615 494 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 ZSWIM1Q9BR11 485 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 TRIM62Q9BVG3 475 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 TTLL2Q9BWV7 592 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 APOL5Q9BWW9 433 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 S1PR5Q9H228 398 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 DEF6Q9H4E7 631 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 HAUS4Q9H6D7 363 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 ACP6Q9NPH0 428 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 AVENQ9NQS1 362 aaPredicted RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 CNGB3Q9NQW8 809 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 ABHD10Q9NUJ1 306 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 TRPM5Q9NZQ8 1165 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 THEGQ9P2T0 379 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 MRPS23Q9Y3D9 190 aaKnown RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 NCANO14594 1321 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 CLUHO75153 1309 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 GREB1Q4ZG55 1949 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 SSU72P8A0A1W2PR75 194 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 SOBPA7XYQ1 873 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 BEST1O76090 585 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 ZBED1O96006 694 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 CALCAP01258 141 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 HMGA1P17096 107 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 PFKLP17858 780 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 FSHRP23945 695 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 DDX6P26196 483 aaKnown RBP eCLIP8.04□□□□□ -1.12
TDP1-214ENST00000556063 GABRR2P28476 465 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 CDH5P33151 784 aaPredicted RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 NSFP46459 744 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 TKTL1P51854 596 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 KIF11P52732 1056 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 CACNA2D1P54289 1103 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 ADKP55263 362 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 CDK17Q00537 523 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 FMO1Q01740 532 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 IFRD2Q12894 506 aaPredicted RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 TAF10Q12962 218 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 PDCLQ13371 301 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 CBX2Q14781 532 aaPredicted RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 ARID5BQ14865 1188 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 CLUL1Q15846 466 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 PMF1Q6P1K2 205 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 OTOP3Q7RTS5 596 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 TADA2BQ86TJ2 420 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 MON1AQ86VX9 555 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 ERICH1Q86X53 443 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 SCML4Q8N228 414 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 SPC24Q8NBT2 197 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 C1orf131Q8NDD1 294 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 STKLD1Q8NE28 680 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 SLC20A1Q8WUM9 679 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 DDX1Q92499 740 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 PPP1R13BQ96KQ4 1090 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 CCDC42Q96M95 316 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 DCBLD2Q96PD2 775 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 PANX2Q96RD6 677 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 CDK5RAP1Q96SZ6 601 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.04□□□□□ -1.12
TDP1-214ENST00000556063 SLC4A5Q9BY07 1137 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 ATXN3LQ9H3M9 355 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 WDR6Q9NNW5 1121 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 TLR8Q9NR97 1041 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.04□□□□□ -1.12
TDP1-214ENST00000556063 IL37Q9NZH6 218 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 DNMT3BQ9UBC3 853 aaKnown RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 STRIP2Q9ULQ0 834 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 SCML2Q9UQR0 700 aa8.04□□□□□ -1.12
TDP1-214ENST00000556063 USP15Q9Y4E8 981 aaPredicted RBP8.04□□□□□ -1.12
TDP1-214ENST00000556063 ZFP37Q9Y6Q3 630 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms