RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 PGM3O95394 542 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 NDUFB10O96000 172 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 CALCAP01258 141 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TFAP2AP05549 437 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 SNRPAP09012 282 aaKnown RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 RPL22P35268 128 aaKnown RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 SERPINB8P50452 374 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 ERFP50548 548 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 COPAP53621 1224 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TAP1Q03518 808 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 GAD2Q05329 585 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 SNAPC2Q13487 334 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 ADRM1Q16186 407 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 LRRC36Q1X8D7 754 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 KBTBD12Q3ZCT8 623 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 OGFRL1Q5TC84 451 aaPredicted RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 ANGEL2Q5VTE6 544 aaKnown RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 WDR78Q5VTH9 848 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TMEM179Q6ZVK1 233 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 ARCQ7LC44 396 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 MIER3Q7Z3K6 550 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 POLNQ7Z5Q5 900 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 ZNF554Q86TJ5 538 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 SLC51AQ86UW1 340 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TMEM126BQ8IUX1 230 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 NUDCD3Q8IVD9 361 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 AHI1Q8N157 1196 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 RSAD2Q8WXG1 361 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 CLMNQ96JQ2 1002 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 FAM96AQ9H5X1 160 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 ZNF696Q9H7X3 374 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TBCCD1Q9NVR7 557 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 RAB26Q9ULW5 256 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 DTNAQ9Y4J8 743 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 SF3B1O75533 1304 aaKnown RBP eCLIP8.1□□□□□ -1.113e-6■■■■■ 137.9
CHD8-209ENST00000555935 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 PIAS1O75925 651 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TMEM63AO94886 807 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TNFAIP8O95379 198 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 CALB1P05937 261 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 VIL1P09327 827 aaKnown RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 C6orf222P0C671 652 aaPredicted RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 MYL4P12829 197 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 PSMC5P62195 406 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 PIGHQ14442 188 aaPredicted RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 CHI3L2Q15782 390 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 FBXL19Q6PCT2 694 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 C15orf39Q6ZRI6 1047 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TMC7Q7Z402 723 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 WDR75Q8IWA0 830 aaKnown RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 RNF168Q8IYW5 571 aaPredicted RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 NUP93Q8N1F7 819 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 CATSPER1Q8NEC5 780 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 GAB3Q8WWW8 586 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 RPGRQ92834 1020 aaKnown RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 C6orf203Q9P0P8 240 aaPredicted RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 PADI4Q9UM07 663 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TBX20Q9UMR3 447 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 TELO2Q9Y4R8 837 aa8.1□□□□□ -1.11
CHD8-209ENST00000555935 ASTN2O75129 1339 aaPredicted RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 ZNF335Q9H4Z2 1342 aaPredicted RBP8.1□□□□□ -1.11
CHD8-209ENST00000555935 MEI4A8MW99 385 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 TRIM49D1C9J1S8 452 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 FAM189A1O60320 539 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 CFBP00751 764 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 WEE2P0C1S8 567 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 FAM163BP0C2L3 166 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 ARP10275 920 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 CDK4P11802 303 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 RAG1P15918 1043 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 MMP8P22894 467 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 ACAT1P24752 427 aaKnown RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 GNA15P30679 374 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 SERPINB6P35237 376 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 ELK3P41970 407 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 PEX3P56589 373 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 GTF2IP78347 998 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 SLC25A3Q00325 362 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 NCOA4Q13772 614 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 KRT81Q14533 505 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 GRAMD1BQ3KR37 738 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 USP41Q3LFD5 358 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 NADK2Q4G0N4 442 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 BRDTQ58F21 947 aaPredicted RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 CC2D2BQ6DHV5 1058 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 CDC42EP5Q6NZY7 148 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 CDHR3Q6ZTQ4 885 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 BBS12Q6ZW61 710 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 SIAH1Q8IUQ4 282 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 MAP7D3Q8IWC1 876 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 NIPA2Q8N8Q9 360 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 ACTL9Q8TC94 416 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 PI4K2AQ9BTU6 479 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 FRMD8Q9BZ67 464 aaPredicted RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 DHX33Q9H6R0 707 aaKnown RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 SMYD3Q9H7B4 428 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 NRDE2Q9H7Z3 1164 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 THAP1Q9NVV9 213 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 BTBD7Q9P203 1132 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms