RNA–Protein interactions for RNA: ENST00000555830.1

SDR39U1-215, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 418 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-215ENST00000555830 COQ4Q9Y3A0 265 aa16.61■□□□□ 0.25
SDR39U1-215ENST00000555830 COL4A2P08572 1712 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 FAM170BA6NMN3 283 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 GALR2O43603 387 aaPredicted RBP16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 WEE1P30291 646 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 IFNAR2P48551 515 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 FCHO2Q0JRZ9 810 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 DPCR1Q3MIW9 517 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 PAQR9Q6ZVX9 377 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 FAM114A1Q8IWE2 563 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 TRIM59Q8IWR1 403 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 PRSS33Q8NF86 280 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 CYP2S1Q96SQ9 504 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 HNRNPABQ99729 332 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 SMOQ99835 787 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 FBXO44Q9H4M3 255 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 LTB4R2Q9NPC1 389 aa16.6■□□□□ 0.25
SDR39U1-215ENST00000555830 PES1O00541 588 aaKnown RBP16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 P4HA2O15460 535 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 MBL2P11226 248 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 NUBP1P53384 320 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 ZNF268Q14587 947 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 MTF1Q14872 753 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 PPP1R26Q5T8A7 1209 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 CCDC105Q8IYK2 499 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 DTWD2Q8NBA8 298 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 SCAMP5Q8TAC9 235 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 SH3RF2Q8TEC5 729 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 WHAMMQ8TF30 809 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 FAM3CQ92520 227 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 IRF2BPLQ9H1B7 796 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 FAM124BQ9H5Z6 455 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 C8orf33Q9H7E9 229 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 GKN1Q9NS71 199 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 SMPD4Q9NXE4 827 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 GMIPQ9P107 970 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 GCNT4Q9P109 453 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 HESX1Q9UBX0 185 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 ARIH1Q9Y4X5 557 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 PCDHB4Q9Y5E5 795 aa16.59■□□□□ 0.25
SDR39U1-215ENST00000555830 ZNF840PA6NDX5 716 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 H0Y858 1186 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 BEST1O76090 585 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 MBD3O95983 291 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 PFKLP17858 780 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 ACO1P21399 889 aaKnown RBP16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 RAD23BP54727 409 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 TNK2Q07912 1038 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 GOLGA7BQ2TAP0 167 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 ITPRIPL2Q3MIP1 535 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 SGO2Q562F6 1265 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 TMEM270Q6UE05 265 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 CLEC20AQ6ZU45 233 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 SLC4A11Q8NBS3 891 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 OVCA2Q8WZ82 227 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 ATOH1Q92858 354 aaPredicted RBP16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 MSANTD3Q96H12 275 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 SLC22A12Q96S37 553 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 NELL2Q99435 816 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 INTS2Q9H0H0 1204 aaKnown RBP16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 TRPV5Q9NQA5 729 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 TLR8Q9NR97 1041 aaKnown RBP16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 COMMD8Q9NX08 183 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 DUS2Q9NX74 493 aaKnown RBP16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 GTSE1Q9NYZ3 720 aa16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 CHORDC1Q9UHD1 332 aaPredicted RBP16.58■□□□□ 0.24
SDR39U1-215ENST00000555830 MUC6Q6W4X9 2439 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 KRT5P13647 590 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 GLULP15104 373 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 TARSP26639 723 aaKnown RBP16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 PLA2G5P39877 138 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 SOX9P48436 509 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 MARSP56192 900 aaKnown RBP16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 USP4Q13107 963 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 PDGFRLQ15198 375 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 HSP90AA4PQ58FG1 418 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 HECTD3Q5T447 861 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 TRIM68Q6AZZ1 485 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 C1orf228Q6PIY5 440 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 SASS6Q6UVJ0 657 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 CPA6Q8N4T0 437 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 ZMIZ2Q8NF64 920 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 LRRC3BQ96PB8 259 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 DUSP16Q9BY84 665 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 EBF3Q9H4W6 596 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 CSNK1G1Q9HCP0 422 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 SPATA6Q9NWH7 488 aaPredicted RBP16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 ARHGAP26Q9UNA1 814 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 CPQQ9Y646 472 aa16.57■□□□□ 0.24
SDR39U1-215ENST00000555830 SPECC1L-ADORA2AF8WAN1 911 aa16.56■□□□□ 0.24
SDR39U1-215ENST00000555830 PMM2O15305 246 aa16.56■□□□□ 0.24
SDR39U1-215ENST00000555830 PRKCSHP14314 528 aaPredicted RBP16.56■□□□□ 0.24
SDR39U1-215ENST00000555830 ERCC5P28715 1186 aaPredicted RBP16.56■□□□□ 0.24
SDR39U1-215ENST00000555830 RUNX3Q13761 415 aa16.56■□□□□ 0.24
SDR39U1-215ENST00000555830 ZNF77Q15935 545 aa16.56■□□□□ 0.24
SDR39U1-215ENST00000555830 RRAGAQ7L523 313 aa16.56■□□□□ 0.24
SDR39U1-215ENST00000555830 RALGPS2Q86X27 583 aaPredicted RBP16.56■□□□□ 0.24
SDR39U1-215ENST00000555830 DDX42Q86XP3 938 aaKnown RBP eCLIP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms