RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FSCN2O14926 492 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 HSF2BPO75031 334 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 FGF19O95750 216 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 HAPLN1P10915 354 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 SCNN1AP37088 669 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 TKTL1P51854 596 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 SLC5A3P53794 718 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 GSCP56915 257 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 IFRD2Q12894 506 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 DUSP4Q13115 394 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 ZNF268Q14587 947 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 PTPN20Q4JDL3 420 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 PKDCCQ504Y2 493 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 PPM1LQ5SGD2 360 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 CYP4A22Q5TCH4 519 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 DENND5BQ6ZUT9 1274 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 TADA2BQ86TJ2 420 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 LRRTM3Q86VH5 581 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 TCEAL8Q8IYN2 117 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 SYCE1Q8N0S2 351 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 CCAR2Q8N163 923 aaKnown RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 NUP93Q8N1F7 819 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 ATAD1Q8NBU5 361 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 PDZD8Q8NEN9 1154 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 ZNF564Q8TBZ8 553 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 SLC35F5Q8WV83 523 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 IRGQQ8WZA9 623 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 FAM149B1Q96BN6 582 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 MRPL38Q96DV4 380 aaKnown RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 KLHL5Q96PQ7 755 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 CPXM1Q96SM3 734 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 CDK5RAP1Q96SZ6 601 aaKnown RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 LPIN3Q9BQK8 851 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 ZSWIM1Q9BR11 485 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 THAP2Q9H0W7 228 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 PLEKHA4Q9H4M7 779 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 ZNF576Q9H609 170 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 TLE6Q9H808 572 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 TMLHEQ9NVH6 421 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 STAP1Q9ULZ2 295 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 PYCARDQ9ULZ3 195 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 ASB3Q9Y575 518 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 INSL5Q9Y5Q6 135 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 CAPN9O14815 690 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 XYLBO75191 536 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 ABLIM3O94929 683 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 ZBED1O96006 694 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 C8AP07357 584 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 GLI1P08151 1106 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 KRT3P12035 628 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 RRM1P23921 792 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 GABRB2P47870 512 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 PSEN1P49768 467 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 ERVFC1P60507 584 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 PMF1Q6P1K2 205 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 ZNF662Q6ZS27 426 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 RNF10Q8N5U6 811 aaKnown RBP11.77□□□□□ -0.53
SHMT2-220ENST00000555634 STKLD1Q8NE28 680 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 TRIM58Q8NG06 486 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-220ENST00000555634 SLC7A14Q8TBB6 771 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 KIAA1524Q8TCG1 905 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 SMOQ99835 787 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 NCAPGQ9BPX3 1015 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 SLC4A5Q9BY07 1137 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 RHOBTB2Q9BYZ6 727 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 NSUN3Q9H649 340 aaKnown RBP11.77□□□□□ -0.53
SHMT2-220ENST00000555634 TLR8Q9NR97 1041 aaKnown RBP11.77□□□□□ -0.53
SHMT2-220ENST00000555634 METTL5Q9NRN9 209 aaKnown RBP11.77□□□□□ -0.53
SHMT2-220ENST00000555634 DZANK1Q9NVP4 752 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 TMEM51Q9NW97 253 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 TRMT1Q9NXH9 659 aaKnown RBP11.77□□□□□ -0.53
SHMT2-220ENST00000555634 TAS2R14Q9NYV8 317 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 FBXW11Q9UKB1 542 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 NENFQ9UMX5 172 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 GUCA1BQ9UMX6 200 aa11.77□□□□□ -0.53
SHMT2-220ENST00000555634 FAM170AA1A519 330 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 HIDE1A8MVS5 230 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 MYO1FO00160 1098 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 PIK3R2O00459 728 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 ZNF263O14978 683 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 PJA2O43164 708 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 ATMINO43313 823 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-220ENST00000555634 TGM5O43548 720 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 ARHGEF15O94989 841 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 TUBB4AP04350 444 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 ERBB2P04626 1255 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 CYP1A2P05177 515 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 CFHP08603 1231 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 YWHAQP27348 245 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 SDC4P31431 198 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 ARHGAP25P42331 645 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 PPP3CCP48454 512 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 CLCN4P51793 760 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 SLC6A3Q01959 620 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 TWF1Q12792 350 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms