RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	POLE2	P56282	527 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	DYRK1A	Q13627	763 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	TUBA3C	Q13748	450 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	TAF5	Q15542	800 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	TRIM71	Q2Q1W2	868 aa	Known RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	MANEAL	Q5VSG8	457 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	FNDC7	Q5VTL7	733 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	SFRP4	Q6FHJ7	346 aa	Predicted RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	SULT6B1	Q6IMI4	303 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	TUBA3E	Q6PEY2	450 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	CYP26C1	Q6V0L0	522 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	LRRC55	Q6ZSA7	311 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	GDF7	Q7Z4P5	450 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	SUGP1	Q8IWZ8	645 aa	Known RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	SPART	Q8N0X7	666 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	SLC25A32	Q9H2D1	315 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	CXorf36	Q9H7Y0	433 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	RRN3	Q9NYV6	651 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	HERC5	Q9UII4	1024 aa	Known RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	NDRG4	Q9ULP0	352 aa	Known RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	MRPS17	Q9Y2R5	130 aa	Known RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	MTO1	Q9Y2Z2	717 aa	Known RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	DTNA	Q9Y4J8	743 aa		5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	LRRFIP2	Q9Y608	721 aa	Known RBP	5.1	□□□□□ -1.59
KTN1-222	ENST00000555506	GRXCR1	A8MXD5	290 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	SRGAP2	O75044	1071 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	RPS6KA4	O75676	772 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	ZNF202	O95125	648 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	CFI	P05156	583 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	ELANE	P08246	267 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	PRKAG1	P54619	331 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	RPS7	P62081	194 aa	Known RBP	5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	TOB2	Q14106	344 aa	Predicted RBP	5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	HLX	Q14774	488 aa	Predicted RBP	5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	TIGD6	Q17RP2	521 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	PTCHD3	Q3KNS1	767 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	ARHGAP40	Q5TG30	622 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	TMED8	Q6PL24	325 aa	Predicted RBP	5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	LVRN	Q6Q4G3	990 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	MICALCL	Q6ZW33	695 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	ZNF668	Q96K58	619 aa	Predicted RBP	5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	FAM167B	Q9BTA0	163 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	PARPBP	Q9NWS1	579 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	TRPM5	Q9NZQ8	1165 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	TMOD4	Q9NZQ9	345 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	SORCS3	Q9UPU3	1222 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	FPGT-TNNI3K	V9GXZ4	949 aa		5.09	□□□□□ -1.59
KTN1-222	ENST00000555506	OR2W5	A6NFC9	320 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	NCAM2	O15394	837 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	CCNT2	O60583	730 aa	Known RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	FAM20B	O75063	409 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	USP1	O94782	785 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	SCAF4	O95104	1147 aa	Known RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	ZFPL1	O95159	310 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	NPTX2	P47972	431 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	NDUFV1	P49821	464 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	KLF10	Q13118	480 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	ATP1A4	Q13733	1029 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	E2F2	Q14209	437 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	CD300E	Q496F6	205 aa	Predicted RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	PREPL	Q4J6C6	727 aa	Predicted RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	RBM20	Q5T481	1227 aa	Known RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	KLHL17	Q6TDP4	642 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	ADGRG5	Q8IZF4	528 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	TMEM132C	Q8N3T6	1108 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	DNAJB14	Q8TBM8	379 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	SNX19	Q92543	992 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	UBXN10	Q96LJ8	280 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	OSBPL9	Q96SU4	736 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	TEX101	Q9BY14	249 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	TP63	Q9H3D4	680 aa	Predicted RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	PRDM16	Q9HAZ2	1276 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	GBA2	Q9HCG7	927 aa	Predicted RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	SLC2A4RG	Q9NR83	387 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	HELLS	Q9NRZ9	838 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	DNAJB11	Q9UBS4	358 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	SRP68	Q9UHB9	627 aa	Known RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	ING1	Q9UK53	422 aa	Predicted RBP	5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	GJD2	Q9UKL4	321 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	PNMA2	Q9UL42	364 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506	HS3ST4	Q9Y661	456 aa		5.08	□□□□□ -1.6
KTN1-222	ENST00000555506		A0A0B4J269	797 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	GAGE12B	A1L429	117 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	GAGE12H	A6NDE8	117 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	MYADML2	A6NDP7	307 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	AHRR	A9YTQ3	701 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506		F5H697	171 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	FCHO1	O14526	889 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	PCDH17	O14917	1159 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	CD3EAP	O15446	510 aa	Known RBP	5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	TRIAP1	O43715	76 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	NTSR2	O95665	410 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	VIP	P01282	170 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	CSF1R	P07333	972 aa		5.07	□□□□□ -1.6
KTN1-222	ENST00000555506	AR	P10275	920 aa		5.07	□□□□□ -1.6

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