RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 SMARCD1Q96GM5 515 aa20.66■□□□□ 0.9
CBLN3-202ENST00000555436 KCNK16Q96T55 309 aa20.66■□□□□ 0.9
CBLN3-202ENST00000555436 TMEM8AQ9HCN3 771 aa20.66■□□□□ 0.9
CBLN3-202ENST00000555436 DMAP1Q9NPF5 467 aaPredicted RBP20.66■□□□□ 0.9
CBLN3-202ENST00000555436 HMGXB4Q9UGU5 601 aa20.66■□□□□ 0.9
CBLN3-202ENST00000555436 KIF26AQ9ULI4 1882 aaPredicted RBP20.66■□□□□ 0.9
CBLN3-202ENST00000555436 PTPRDP23468 1912 aa20.66■□□□□ 0.9
CBLN3-202ENST00000555436 GPR179Q6PRD1 2367 aa20.66■□□□□ 0.9
CBLN3-202ENST00000555436 TRDMT1O14717 391 aaKnown RBP20.65■□□□□ 0.9
CBLN3-202ENST00000555436 PAPSS2O95340 614 aaPredicted RBP20.65■□□□□ 0.9
CBLN3-202ENST00000555436 SMC2O95347 1197 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 OLFM2O95897 454 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 OAS1P00973 400 aaKnown RBP20.65■□□□□ 0.9
CBLN3-202ENST00000555436 PRCPP42785 496 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 IFNAR2P48551 515 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 SLC7A9P82251 487 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 INCA1Q0VD86 236 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 OVCA2Q8WZ82 227 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 ATP2A3Q93084 1043 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 TIGD1Q96MW7 591 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 ECT2Q9H8V3 914 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 CYP3A43Q9HB55 503 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 APOBEC3GQ9HC16 384 aaKnown RBP20.65■□□□□ 0.9
CBLN3-202ENST00000555436 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.65■□□□□ 0.9
CBLN3-202ENST00000555436 KRT82Q9NSB4 513 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 IL37Q9NZH6 218 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 WNT6Q9Y6F9 365 aa20.65■□□□□ 0.9
CBLN3-202ENST00000555436 TNFRSF10BO14763 440 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 CETN3O15182 167 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 AP1G2O75843 785 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 ABL1P00519 1130 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 CCDC130P13994 396 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 ZXDBP98169 803 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 GRSF1Q12849 480 aaKnown RBP eCLIP20.64■□□□□ 0.89
CBLN3-202ENST00000555436 IFRD2Q12894 506 aaPredicted RBP20.64■□□□□ 0.89
CBLN3-202ENST00000555436 ORC1Q13415 861 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 EML3Q32P44 896 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 KRT39Q6A163 491 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 FSTL4Q6MZW2 842 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 KIAA1958Q8N8K9 716 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 PDZD8Q8NEN9 1154 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 SLC2A14Q8TDB8 520 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 RUBCNQ92622 972 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 EEF2KMTQ96G04 330 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 GTPBP4Q9BZE4 634 aaKnown RBP20.64■□□□□ 0.89
CBLN3-202ENST00000555436 NIF3L1Q9GZT8 377 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 RNF38Q9H0F5 515 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 EPC1Q9H2F5 836 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 MMRN2Q9H8L6 949 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 HOOK1Q9UJC3 728 aaKnown RBP20.64■□□□□ 0.89
CBLN3-202ENST00000555436 PCDHA5Q9Y5H7 936 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 FANCMQ8IYD8 2048 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 OTOGLQ3ZCN5 2332 aa20.64■□□□□ 0.89
CBLN3-202ENST00000555436 LEFTY2O00292 366 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 EPB41P11171 864 aaKnown RBP20.63■□□□□ 0.89
CBLN3-202ENST00000555436 TRIM21P19474 475 aaKnown RBP20.63■□□□□ 0.89
CBLN3-202ENST00000555436 GJA4P35212 333 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 SLC5A3P53794 718 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 C12orf29Q8N999 325 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 CCDC150Q8NCX0 1101 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 SCAMP5Q8TAC9 235 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 SMARCE1Q969G3 411 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 FBXO32Q969P5 355 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 SMOQ99835 787 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 CSNK1G1Q9HCP0 422 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 COMMD8Q9NX08 183 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 GREB1Q4ZG55 1949 aa20.63■□□□□ 0.89
CBLN3-202ENST00000555436 FAM92AA1XBS5 289 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 NR1H3Q13133 447 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 SNX30Q5VWJ9 437 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 ZMIZ2Q8NF64 920 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 ERCC4Q92889 916 aaPredicted RBP20.62■□□□□ 0.89
CBLN3-202ENST00000555436 EXOC4Q96A65 974 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 TWNKQ96RR1 684 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 TSG101Q99816 390 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 P2RY13Q9BPV8 354 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 NT5C1AQ9BXI3 368 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 LINC00597Q9H2U6 94 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 FAM49BQ9NUQ9 324 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 CPQQ9Y646 472 aa20.62■□□□□ 0.89
CBLN3-202ENST00000555436 K7ESF4 209 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 SLC16A3O15427 465 aaKnown RBP20.61■□□□□ 0.89
CBLN3-202ENST00000555436 STX10O60499 249 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 BEST1O76090 585 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 DRD1P21728 446 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 MXI1P50539 228 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 GALK1P51570 392 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 FKBP3Q00688 224 aaKnown RBP20.61■□□□□ 0.89
CBLN3-202ENST00000555436 ZC3H3Q8IXZ2 948 aaKnown RBP20.61■□□□□ 0.89
CBLN3-202ENST00000555436 ELOA2Q8IYF1 753 aaPredicted RBP20.61■□□□□ 0.89
CBLN3-202ENST00000555436 FAXDC2Q96IV6 333 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 HNRNPABQ99729 332 aaKnown RBP20.61■□□□□ 0.89
CBLN3-202ENST00000555436 HINFPQ9BQA5 517 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 FBRSL1Q9HCM7 1045 aaKnown RBP20.61■□□□□ 0.89
CBLN3-202ENST00000555436 C2orf42Q9NWW7 574 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 SMPD4Q9NXE4 827 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 CHORDC1Q9UHD1 332 aaPredicted RBP20.61■□□□□ 0.89
CBLN3-202ENST00000555436 SMG5Q9UPR3 1016 aaKnown RBP20.61■□□□□ 0.89
CBLN3-202ENST00000555436 WDR87Q6ZQQ6 2873 aa20.61■□□□□ 0.89
CBLN3-202ENST00000555436 ZNF292O60281 2723 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms