RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TRPV5Q9NQA5 729 aa14.49□□□□□ -0.09
SNX6-203ENST00000555416 GKN1Q9NS71 199 aa14.49□□□□□ -0.09
SNX6-203ENST00000555416 GTSE1Q9NYZ3 720 aa14.49□□□□□ -0.09
SNX6-203ENST00000555416 CHORDC1Q9UHD1 332 aaPredicted RBP14.49□□□□□ -0.09
SNX6-203ENST00000555416 SIT1Q9Y3P8 196 aa14.49□□□□□ -0.09
SNX6-203ENST00000555416 CACNA1HO95180 2353 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 PATJQ8NI35 1801 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 TRAV19A0A0A6YYK7 116 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
SNX6-203ENST00000555416 CALCAP01258 141 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 ARSAP15289 507 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 HDCP19113 662 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 ACO1P21399 889 aaKnown RBP14.48□□□□□ -0.09
SNX6-203ENST00000555416 YWHAQP27348 245 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 APBA1Q02410 837 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 UBXN2BQ14CS0 331 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 YAF2Q8IY57 180 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 DTWD2Q8NBA8 298 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 TTC16Q8NEE8 873 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 FBXO32Q969P5 355 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 CHFRQ96EP1 664 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 TMEM176AQ96HP8 235 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 HEXIM2Q96MH2 286 aaKnown RBP14.48□□□□□ -0.09
SNX6-203ENST00000555416 PHOX2BQ99453 314 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 HPS4Q9NQG7 708 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 TRPM5Q9NZQ8 1165 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 GMIPQ9P107 970 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 ARIH1Q9Y4X5 557 aaPredicted RBP14.48□□□□□ -0.09
SNX6-203ENST00000555416 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNX6-203ENST00000555416 PIAS3Q9Y6X2 628 aa14.48□□□□□ -0.09
SNX6-203ENST00000555416 MYH10P35580 1976 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 FAM92AA1XBS5 289 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 FAM170BA6NMN3 283 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 SOBPA7XYQ1 873 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 RNF225M0QZC1 329 aaPredicted RBP14.47□□□□□ -0.09
SNX6-203ENST00000555416 GNA14O95837 355 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 ABL1P00519 1130 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 OAS1P00973 400 aaKnown RBP14.47□□□□□ -0.09
SNX6-203ENST00000555416 AFPP02771 609 aaKnown RBP14.47□□□□□ -0.09
SNX6-203ENST00000555416 CKMP06732 381 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 USP17L7P0C7H9 530 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 FAM200BP0CF97 657 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 RFX1P22670 979 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 NHLH1Q02575 133 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 USP4Q13107 963 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 ZNF268Q14587 947 aaPredicted RBP14.47□□□□□ -0.09
SNX6-203ENST00000555416 ZNF77Q15935 545 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 ARHGAP29Q52LW3 1261 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 TXNDC11Q6PKC3 985 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 RRAGAQ7L523 313 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 SH3RF2Q8TEC5 729 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 SHDQ96IW2 340 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 FAM83CQ9BQN1 747 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 ZSWIM1Q9BR11 485 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 INTS2Q9H0H0 1204 aaKnown RBP14.47□□□□□ -0.09
SNX6-203ENST00000555416 ZMYM5Q9UJ78 669 aa14.47□□□□□ -0.09
SNX6-203ENST00000555416 H0Y858 1186 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 TULP2O00295 520 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 SCAMP3O14828 347 aaKnown RBP14.46□□□□□ -0.09
SNX6-203ENST00000555416 P4HA2O15460 535 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 RTN3O95197 1032 aaPredicted RBP14.46□□□□□ -0.09
SNX6-203ENST00000555416 OLFM2O95897 454 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 ZDHHC11BP0C7U3 371 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 CCDC192P0DO97 292 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 HSP90AA4PQ58FG1 418 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 NAIF1Q69YI7 327 aaPredicted RBP14.46□□□□□ -0.09
SNX6-203ENST00000555416 RBM43Q6ZSC3 357 aaKnown RBP14.46□□□□□ -0.09
SNX6-203ENST00000555416 TTC30AQ86WT1 665 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 CREBRFQ8IUR6 639 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 PPM1KQ8N3J5 372 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 EHBP1Q8NDI1 1231 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 TFAP2BQ92481 460 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 KREMEN1Q96MU8 473 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 NT5C1BQ96P26 610 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 SLITRK1Q96PX8 696 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 CRACR2AQ9BSW2 395 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 DUSP16Q9BY84 665 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 KCNH6Q9H252 994 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 EBF3Q9H4W6 596 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 CCSER2Q9H7U1 834 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 FAM86C1Q9NVL1 165 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 OSER1Q9NX31 292 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 SMPD4Q9NXE4 827 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 NDRG2Q9UN36 371 aaKnown RBP14.46□□□□□ -0.09
SNX6-203ENST00000555416 ARHGAP26Q9UNA1 814 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 WNT6Q9Y6F9 365 aa14.46□□□□□ -0.09
SNX6-203ENST00000555416 HELZP42694 1942 aaKnown RBP14.46□□□□□ -0.09
SNX6-203ENST00000555416 MIA3Q5JRA6 1907 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 CYP26A1O43174 497 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 COCHO43405 550 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 CTHP32929 405 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 PLA2G5P39877 138 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 KPNA1P52294 538 aaPredicted RBP14.45□□□□□ -0.1
SNX6-203ENST00000555416 MTF1Q14872 753 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 ARHGAP17Q68EM7 881 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 GJB7Q6PEY0 223 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 ZNF852Q6ZMS4 543 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 CSGALNACT1Q8TDX6 532 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 FAM3CQ92520 227 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 WBP2Q969T9 261 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms