RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
NEK9-205ENST00000555405 COG1Q8WTW3 980 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 KRT35Q92764 455 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 TRIM11Q96F44 468 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 SMARCD1Q96GM5 515 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 HEMGNQ9BXL5 484 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 MRPL17Q9NRX2 175 aaKnown RBP10.72□□□□□ -0.69
NEK9-205ENST00000555405 SAR1BQ9Y6B6 198 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 RFXAPO00287 272 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 SCAMP3O14828 347 aaKnown RBP10.72□□□□□ -0.69
NEK9-205ENST00000555405 TYMPP19971 482 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 KLRC2P26717 231 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 AARSP49588 968 aaKnown RBP eCLIP10.72□□□□□ -0.69
NEK9-205ENST00000555405 ATXN1P54253 815 aaKnown RBP10.72□□□□□ -0.69
NEK9-205ENST00000555405 CC2D1AQ6P1N0 951 aaPredicted RBP10.72□□□□□ -0.69
NEK9-205ENST00000555405 SLC39A11Q8N1S5 342 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 RNF10Q8N5U6 811 aaKnown RBP10.72□□□□□ -0.69
NEK9-205ENST00000555405 SLC35F5Q8WV83 523 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 HSPH1Q92598 858 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 TMEM175Q9BSA9 504 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 VN1R3Q9BXE9 311 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 LHX5Q9H2C1 402 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 GPATCH2LQ9NWQ4 482 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 STRIP2Q9ULQ0 834 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 SCINQ9Y6U3 715 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 SYN3O14994 580 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 RNF8O76064 485 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 HMBSP08397 361 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 NCAM1P13591 858 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 TCF4P15884 667 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 ROR1Q01973 937 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 CRIPAKQ8N1N5 446 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 ZBTB9Q96C00 473 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 TCF25Q9BQ70 676 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 DMAP1Q9NPF5 467 aaPredicted RBP10.71□□□□□ -0.69
NEK9-205ENST00000555405 JRKLQ9Y4A0 524 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 H7C4K7 107 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 LPXNO60711 386 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 GABBR2O75899 941 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 CYP1A2P05177 515 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 GGCXP38435 758 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 OGDHQ02218 1023 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 MAPRE1Q15691 268 aaKnown RBP10.71□□□□□ -0.69
NEK9-205ENST00000555405 NFE2Q16621 373 aaPredicted RBP10.71□□□□□ -0.69
NEK9-205ENST00000555405 TEX35Q5T0J7 233 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 ARHGAP17Q68EM7 881 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 ZMIZ2Q8NF64 920 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 POF1BQ8WVV4 589 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 GOLGA1Q92805 767 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 APOL5Q9BWW9 433 aa10.71□□□□□ -0.69
NEK9-205ENST00000555405 SETSIPP0DME0 302 aa10.71□□□□□ -0.7
NEK9-205ENST00000555405 TFE3P19532 575 aaPredicted RBP10.71□□□□□ -0.7
NEK9-205ENST00000555405 NAA30Q147X3 362 aaPredicted RBP10.71□□□□□ -0.7
NEK9-205ENST00000555405 FAM182AQ5T1J6 154 aa10.71□□□□□ -0.7
NEK9-205ENST00000555405 CMTR2Q8IYT2 770 aaKnown RBP10.71□□□□□ -0.7
NEK9-205ENST00000555405 DEFB106AQ8N104 65 aa10.71□□□□□ -0.7
NEK9-205ENST00000555405 ZNF689Q96CS4 500 aaPredicted RBP10.71□□□□□ -0.7
NEK9-205ENST00000555405 FAM118BQ9BPY3 351 aa10.71□□□□□ -0.7
NEK9-205ENST00000555405 NACA2Q9H009 215 aa10.71□□□□□ -0.7
NEK9-205ENST00000555405 CRISPLD1Q9H336 500 aa10.71□□□□□ -0.7
NEK9-205ENST00000555405 UVRAGQ9P2Y5 699 aa10.71□□□□□ -0.7
NEK9-205ENST00000555405 INTUQ9ULD6 942 aa10.71□□□□□ -0.7
NEK9-205ENST00000555405 WDR27A2RRH5 827 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 YJEFN3A6XGL0 299 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 E7ENQ6 273 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 CYP11A1P05108 521 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 MYBL1P10243 752 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 SDC4P31431 198 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 DYNLT1P63172 113 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 PITX1P78337 314 aaPredicted RBP10.7□□□□□ -0.7
NEK9-205ENST00000555405 PTP4A2Q12974 167 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 SYCE1Q8N0S2 351 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.7□□□□□ -0.7
NEK9-205ENST00000555405 FAXDC2Q96IV6 333 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 TLR10Q9BXR5 811 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 AP1M1Q9BXS5 423 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 IGFLR1Q9H665 355 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 NAALADL1Q9UQQ1 740 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 ATP8B3O60423 1300 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 BRWD1Q9NSI6 2320 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 XPO1O14980 1071 aaKnown RBP10.7□□□□□ -0.7
NEK9-205ENST00000555405 MDM4O15151 490 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 OAZ2O95190 189 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 MOCS2O96007 188 aaPredicted RBP10.7□□□□□ -0.7
NEK9-205ENST00000555405 SOD2P04179 222 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 FGFR3P22607 806 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 SLC5A3P53794 718 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 SNX16P57768 344 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 ERVFC1P60507 584 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 SLC6A3Q01959 620 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 PPP6R3Q5H9R7 873 aaPredicted RBP10.7□□□□□ -0.7
NEK9-205ENST00000555405 FAM131BQ86XD5 332 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 C3orf20Q8ND61 904 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 SLC7A14Q8TBB6 771 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 HERVK_113Q902F9 699 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 HAUS1Q96CS2 278 aa10.7□□□□□ -0.7
NEK9-205ENST00000555405 LRRD1A4D1F6 860 aa10.69□□□□□ -0.7
NEK9-205ENST00000555405 MTMR11A4FU01 709 aa10.69□□□□□ -0.7
NEK9-205ENST00000555405 ZBED1O96006 694 aa10.69□□□□□ -0.7
NEK9-205ENST00000555405 PAFAH1B1P43034 410 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms