RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 MIPOL1Q8TD10 442 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 TCP10LQ8TDR4 215 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 WDR60Q8WVS4 1066 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 OXNAD1Q96HP4 312 aaPredicted RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 MSTO1Q9BUK6 570 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 KCNK13Q9HB14 408 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 FBXO40Q9UH90 709 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 RABGEF1Q9UJ41 708 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 PCDHB4Q9Y5E5 795 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 WDR81Q562E7 1941 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 IGKV6D-21A0A0A0MT36 114 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 A0A0B4J269 797 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 A0A0G2JND7 137 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 A0A1W2PPM1 405 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 ATP9BO43861 1147 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 VNN1O95497 513 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 ITGAVP06756 1048 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 IMPDH2P12268 514 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 GLRA2P23416 452 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 SERPINB3P29508 390 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 SP4Q02446 784 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 MAP7Q14244 749 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 SURF1Q15526 300 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 SH3D19Q5HYK7 790 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 FAM160B1Q5W0V3 765 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 PLEKHA7Q6IQ23 1121 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 ZPBP2Q6X784 338 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 CCNJLQ8IV13 435 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 ZBED8Q8IZ13 594 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 CPA5Q8WXQ8 436 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 APBB2Q92870 758 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 NKD2Q969F2 451 aaPredicted RBP11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 IMPG2Q9BZV3 1241 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 DCTN4Q9UJW0 460 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 SORCS3Q9UPU3 1222 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 NUMBLQ9Y6R0 609 aa11.17□□□□□ -0.62
MTHFD1-210ENST00000555252 IQANK1A0A1B0GTG1 560 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 LRRIQ4A6NIV6 560 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 BTBD19C9JJ37 291 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 E7ESA3 106 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 FZD9O00144 591 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 GNA15P30679 374 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 ARSEP51690 589 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 NOMO3P69849 1222 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 IRX4P78413 519 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 NFX1Q12986 1120 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 GRM2Q14416 872 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 HIF1AQ16665 826 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 SCUBE1Q8IWY4 988 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 RBM12BQ8IXT5 1001 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 KBTBD2Q8IY47 623 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 EXOC8Q8IYI6 725 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 RAB3IL1Q8TBN0 382 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 APOPT1Q96IL0 206 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 PARVAQ9NVD7 372 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 IP6K2Q9UHH9 426 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 GJA3Q9Y6H8 435 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 ADGRA2Q96PE1 1338 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 COL11A1P12107 1806 aaPredicted RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 SIP14410 1827 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 CAPN14A8MX76 684 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 FCHO1O14526 889 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 AP1G1O43747 822 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 ETV4P43268 484 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 ACOT2P49753 483 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 NEK3P51956 506 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 EFNA5P52803 228 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 VCPP55072 806 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 ARL4CP56559 192 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 SLC18A2Q05940 514 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 PDIA2Q13087 525 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 GPS1Q13098 491 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 CBLBQ13191 982 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 OASLQ15646 514 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 MAP3K21Q5TCX8 1036 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 IZUMO2Q6UXV1 221 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 KLHL23Q8NBE8 558 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 FEZF2Q8TBJ5 459 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 IRGQQ8WZA9 623 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 TMEM143Q96AN5 459 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 PPP1R14BQ96C90 147 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 KLRG1Q96E93 195 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 FAM161BQ96MY7 647 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 C7orf26Q96N11 449 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 PAFAH2Q99487 392 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 HEMGNQ9BXL5 484 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 SUDS3Q9H7L9 328 aaPredicted RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 PLA2G4CQ9UP65 541 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 ZNF148Q9UQR1 794 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 LOC285556D6RIA3 1793 aa11.16□□□□□ -0.62
MTHFD1-210ENST00000555252 GAS2O43903 313 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 ADCY3O60266 1144 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 SPAG6O75602 509 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 LSM8O95777 96 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 CALB1P05937 261 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 GPX6P59796 221 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 NOP14P78316 857 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms