RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PRKG1Q13976 671 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 ARHGAP15Q53QZ3 475 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 TMTC4Q5T4D3 741 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 TEDDM1Q5T9Z0 273 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 DTX2Q86UW9 622 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 ABRAQ8N0Z2 381 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 LNX2Q8N448 690 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 SLC30A5Q8TAD4 765 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 ABHD5Q8WTS1 349 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 CACTINQ8WUQ7 758 aaKnown RBP6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 TMEM171Q8WVE6 324 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 ATRIPQ8WXE1 791 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 ATG4AQ8WYN0 398 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 EID2BQ96D98 161 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 INO80BQ9C086 356 aaPredicted RBP6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 TESQ9UGI8 421 aaKnown RBP6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 DTNAQ9Y4J8 743 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 DGKBQ9Y6T7 804 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 CCDC189A1A4V9 331 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 OR2W5A6NFC9 320 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 VIPP01282 170 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 C1SP09871 688 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 HGFP14210 728 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 PECAM1P16284 738 aaPredicted RBP6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 ADORA2AP29274 412 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 RENBPP51606 427 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 TP53BP2Q13625 1128 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 ATP1A4Q13733 1029 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 SF3B3Q15393 1217 aaKnown RBP6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 TRIM71Q2Q1W2 868 aaKnown RBP6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 SPATS1Q496A3 300 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 DEPDC1Q5TB30 811 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 LDHAL6AQ6ZMR3 332 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 RFX8Q6ZV50 586 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 IZUMO1Q8IYV9 350 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 MBD3L2Q8NHZ7 208 aaPredicted RBP6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 SSH3Q8TE77 659 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 STYXQ8WUJ0 223 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 GRAMD1AQ96CP6 724 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 HIST1H2AAQ96QV6 131 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 GRHPRQ9UBQ7 328 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 USP22Q9UPT9 525 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 SNX14Q9Y5W7 946 aa6.33□□□□□ -1.4
CKS1BP1-201ENST00000555221 TRIM38O00635 465 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 PPM1DO15297 605 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 PROM1O43490 865 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 ASNA1O43681 348 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 ITGA2BP08514 1039 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 HSD3B1P14060 373 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 RBL1P28749 1068 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 GATMP50440 423 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 ATXN1P54253 815 aaKnown RBP6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 BLOC1S1P78537 153 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 TIAL1Q01085 375 aaKnown RBP eCLIP6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 ABHD17BQ5VST6 288 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 ABLIM2Q6H8Q1 611 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 KCNV1Q6PIU1 500 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 GPR149Q86SP6 731 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 RASGRP3Q8IV61 690 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 LPIN2Q92539 896 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 PGBD1Q96JS3 809 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 C17orf80Q9BSJ5 609 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 KATNAL1Q9BW62 490 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 NRDE2Q9H7Z3 1164 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 GLOD4Q9HC38 313 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 VPS51Q9UID3 782 aa6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 HERC5Q9UII4 1024 aaKnown RBP6.32□□□□□ -1.4
CKS1BP1-201ENST00000555221 CENPVL1A0A0U1RR11 272 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 BTBD11A6QL63 1104 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 SLC16A3O15427 465 aaKnown RBP6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 LPXNO60711 386 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 TNFRSF6BO95407 300 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 NTSR2O95665 410 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 DHRS4L1P0CG22 281 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 SRGAP2BP0DMP2 458 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 ARP10275 920 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 CD19P15391 556 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 ALDH18A1P54886 795 aaKnown RBP6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 SCAPQ12770 1279 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 PPFIA1Q13136 1202 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 TUBA3CQ13748 450 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 LY6G5CQ5SRR4 150 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 TANGO2Q6ICL3 276 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 VWA1Q6PCB0 445 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 TUBA3EQ6PEY2 450 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 RHOUQ7L0Q8 258 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 TTC30AQ86WT1 665 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 RAB11FIP4Q86YS3 637 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 GALNT15Q8N3T1 639 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 TOR1AIP2Q8NFQ8 470 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 MYCBPAPQ8TBZ2 947 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 FKBP10Q96AY3 582 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 ALG8Q9BVK2 526 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 VN1R3Q9BXE9 311 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 CASS4Q9NQ75 786 aa6.31□□□□□ -1.4
CKS1BP1-201ENST00000555221 PIPSLA2A3N6 862 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 FGAP02671 866 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 ITGAMP11215 1152 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms