RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SLC35F6Q8N357 371 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 PRDM12Q9H4Q4 367 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 ZNF576Q9H609 170 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 LUC7LQ9NQ29 371 aaKnown RBP11.36□□□□□ -0.59
TDP1-211ENST00000555178 LZTS1Q9Y250 596 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 CEP83Q9Y592 693 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 TNNT1P13805 278 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 EPCAMP16422 314 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 NOP2P46087 812 aaKnown RBP11.35□□□□□ -0.59
TDP1-211ENST00000555178 GPC5P78333 572 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 RAB33AQ14088 237 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 LRIT3Q3SXY7 679 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 LILRA6Q6PI73 481 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 ERICH1Q86X53 443 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 VN1R2Q8NFZ6 395 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 GIPC2Q8TF65 315 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 RFFLQ8WZ73 363 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 ZNF592Q92610 1267 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 TSGA10Q9BZW7 698 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 HESX1Q9UBX0 185 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 INTUQ9ULD6 942 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 RWDD3Q9Y3V2 267 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 HYOU1Q9Y4L1 999 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 COL6A3P12111 3177 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 GRID2IPA4D2P6 1211 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 GOLGA6L9A6NEM1 432 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 GOLGA8SH3BPF8 625 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 CYP1A2P05177 515 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 LCP1P13796 627 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 NPR3P17342 541 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 BCAT1P54687 386 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 BST2Q10589 180 aaKnown RBP11.35□□□□□ -0.59
TDP1-211ENST00000555178 ADGRE1Q14246 886 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 STILQ15468 1287 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 DAB2IPQ5VWQ8 1189 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 DCP1BQ8IZD4 617 aaKnown RBP11.35□□□□□ -0.59
TDP1-211ENST00000555178 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 SEPT5Q99719 369 aaPredicted RBP11.35□□□□□ -0.59
TDP1-211ENST00000555178 MIS12Q9H081 205 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 CSNK1G1Q9HCP0 422 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 CTTNBP2NLQ9P2B4 639 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 DNAI1Q9UI46 699 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 PCDHB5Q9Y5E4 795 aa11.35□□□□□ -0.59
TDP1-211ENST00000555178 ATP8B3O60423 1300 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 ENC1O14682 589 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 TNFRSF10BO14763 440 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 KIF5CO60282 957 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 CLASP2O75122 1294 aaKnown RBP11.34□□□□□ -0.59
TDP1-211ENST00000555178 PALMO75781 387 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 FAM200BP0CF97 657 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 HAPLN1P10915 354 aaPredicted RBP11.34□□□□□ -0.59
TDP1-211ENST00000555178 GRIK1P39086 918 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 RPL7AP62424 266 aaKnown RBP11.34□□□□□ -0.59
TDP1-211ENST00000555178 ETF1P62495 437 aaKnown RBP11.34□□□□□ -0.59
TDP1-211ENST00000555178 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
TDP1-211ENST00000555178 IFRD2Q12894 506 aaPredicted RBP11.34□□□□□ -0.59
TDP1-211ENST00000555178 SMC1AQ14683 1233 aaKnown RBP11.34□□□□□ -0.59
TDP1-211ENST00000555178 TRNP1Q6NT89 227 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 HFE2Q6ZVN8 426 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 FAM183BPQ6ZVS7 135 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 XYLT1Q86Y38 959 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 SLC22A17Q8WUG5 538 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 KHSRPQ92945 711 aaKnown RBP eCLIP11.34□□□□□ -0.595e-6■■□□□ 14.1
TDP1-211ENST00000555178 SMARCD1Q96GM5 515 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 SYNCQ9H7C4 482 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 CYP4F11Q9HBI6 524 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 FNIP2Q9P278 1114 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 CDH22Q9UJ99 828 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 PACSIN2Q9UNF0 486 aaPredicted RBP11.34□□□□□ -0.59
TDP1-211ENST00000555178 IRAK3Q9Y616 596 aa11.34□□□□□ -0.59
TDP1-211ENST00000555178 TCRBV5S1A1TA0A578 114 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 BTNL10A8MVZ5 291 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 LINC01565O15544 149 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 PAPSS1O43252 624 aaPredicted RBP11.33□□□□□ -0.59
TDP1-211ENST00000555178 NCK2O43639 380 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 BUB1BO60566 1050 aaPredicted RBP11.33□□□□□ -0.59
TDP1-211ENST00000555178 RFPL2O75678 378 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 GRAP2O75791 330 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 FTCDO95954 541 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 ATF2P15336 505 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 KLRC2P26717 231 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 CLCN4P51793 760 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 ADIGQ0VDE8 80 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 MAMLD1Q13495 774 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 MGAT5BQ3V5L5 792 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 CFAP221Q4G0U5 840 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 RAB6CQ53S08 254 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 Q7L0L9 218 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 BHLHA9Q7RTU4 235 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 TPCN2Q8NHX9 752 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 ZNF564Q8TBZ8 553 aaPredicted RBP11.33□□□□□ -0.59
TDP1-211ENST00000555178 SAMD11Q96NU1 681 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 RAB6CQ9H0N0 254 aa11.33□□□□□ -0.59
TDP1-211ENST00000555178 A0A0A6YYK5 440 aaPredicted RBP11.33□□□□□ -0.6
TDP1-211ENST00000555178 TMEM110-MUSTN1A8MSY1 372 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms