RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 E7ESA3 106 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 DYNC1LI2O43237 492 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 ECM2O94769 699 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 RPL22P35268 128 aaKnown RBP22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 PNPLA4P41247 253 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 LIG3P49916 1009 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 CDH6P55285 790 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 CBLBQ13191 982 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 LACTB2Q53H82 288 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 PPP1R26Q5T8A7 1209 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 CYP4V2Q6ZWL3 525 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 ARCQ7LC44 396 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 CCDC13Q8IYE1 715 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 MICALL1Q8N3F8 863 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 SLC35F5Q8WV83 523 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 CKAP2Q8WWK9 683 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 CPT1BQ92523 772 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 SGSM3Q96HU1 749 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 ZNF560Q96MR9 790 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 PEBP4Q96S96 227 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 TRIM6Q9C030 488 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 NKIRAS1Q9NYS0 192 aa22.24■■□□□ 1.15
ARHGEF40-204ENST00000555038 ADCY6O43306 1168 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 RBP3P10745 1247 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 GHRP10912 638 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 PPARDQ03181 441 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 PDIA2Q13087 525 aaKnown RBP22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 MAP2K5Q13163 448 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 MORN1Q5T089 497 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 C9orf57Q5W0N0 161 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 TTC30AQ86WT1 665 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 ZBED8Q8IZ13 594 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 KAT2BQ92831 832 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 PTPN18Q99952 460 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 EIF2AQ9BY44 585 aaKnown RBP22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 KDM4CQ9H3R0 1056 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 KCNK9Q9NPC2 374 aa22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.23■■□□□ 1.15
ARHGEF40-204ENST00000555038 CFAP69A5D8W1 941 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 MDM4O15151 490 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 VIMP08670 466 aaKnown RBP22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 TGM2P21980 687 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 SDC4P31431 198 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 GDF10P55107 478 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 ADAM17P78536 824 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 ROR1Q01973 937 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 DPYSL3Q14195 570 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 MFSD10Q14728 455 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 CCDC14Q49A88 953 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 TRNP1Q6NT89 227 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 CYP4X1Q8N118 509 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 C12orf29Q8N999 325 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 ATP11CQ8NB49 1132 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 SPATA18Q8TC71 538 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 RNF157Q96PX1 679 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 OSMRQ99650 979 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 SAE1Q9UBE0 346 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 TUBGCP4Q9UGJ1 667 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 HAS3O00219 553 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 RECQL4O94761 1208 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 KCNE1P15382 129 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 ACTN3Q08043 901 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 TTC31Q49AM3 519 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 XKR4Q5GH76 650 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 PMF1Q6P1K2 205 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 ACOT1Q86TX2 421 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 TRABD2AQ86V40 505 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 CRYBG2Q8N1P7 616 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 FRMD8Q9BZ67 464 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 VPS37BQ9H9H4 285 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 GDAP2Q9NXN4 497 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 ZMYND8Q9ULU4 1186 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 Q9Y3F1 56 aa22.22■■□□□ 1.15
ARHGEF40-204ENST00000555038 PDCD11Q14690 1871 aaKnown RBP22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 RASA4BC9J798 803 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 PIRO00625 290 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 RASA4O43374 803 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 GCAP28676 217 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 PTPN9P43378 593 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 IFNAR2P48551 515 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 RPL34P49207 117 aaKnown RBP22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 CPT1AP50416 773 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 KRT81Q14533 505 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 TAF5Q15542 800 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 EFHC2Q5JST6 749 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 FBXO47Q5MNV8 452 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 TLK2Q86UE8 772 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 UNC45BQ8IWX7 931 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 SRRM1Q8IYB3 904 aaKnown RBP22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 SMG5Q9UPR3 1016 aaKnown RBP22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 GINS2Q9Y248 185 aa22.21■■□□□ 1.15
ARHGEF40-204ENST00000555038 PRPF4O43172 522 aaKnown RBP eCLIP22.2■■□□□ 1.149e-7■■■□□ 14.9
ARHGEF40-204ENST00000555038 PSEN2P49810 448 aa22.2■■□□□ 1.14
ARHGEF40-204ENST00000555038 BCAT1P54687 386 aa22.2■■□□□ 1.14
ARHGEF40-204ENST00000555038 TMEM62Q0P6H9 643 aa22.2■■□□□ 1.14
ARHGEF40-204ENST00000555038 FASTKD3Q14CZ7 662 aaKnown RBP22.2■■□□□ 1.14
ARHGEF40-204ENST00000555038 TMED2Q15363 201 aa22.2■■□□□ 1.14
ARHGEF40-204ENST00000555038 C15orf59Q2T9L4 293 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms