RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 GLP2RO95838 553 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 FTLP02792 175 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-215ENST00000554997 PTPN2P17706 415 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 MMP8P22894 467 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 YWHAQP27348 245 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 GABRB2P47870 512 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 TKTL1P51854 596 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 KIF11P52732 1056 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 CENPCQ03188 943 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 VEPH1Q14D04 833 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 SDHAF4Q5VUM1 108 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 NAA35Q5VZE5 725 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 PM20D1Q6GTS8 502 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 ANKRD54Q6NXT1 300 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 ALKBH5Q6P6C2 394 aaKnown RBP10.75□□□□□ -0.69
SYNE2-215ENST00000554997 DENND5BQ6ZUT9 1274 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 PHF13Q86YI8 300 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-215ENST00000554997 TMEM139Q8IV31 216 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 SCUBE3Q8IX30 993 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 SCML4Q8N228 414 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 ELMOD1Q8N336 334 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 C1orf131Q8NDD1 294 aaKnown RBP10.75□□□□□ -0.69
SYNE2-215ENST00000554997 CCDC112Q8NEF3 446 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 GPR152Q8TDT2 470 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 GIPC2Q8TF65 315 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 PSMG2Q969U7 264 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 C18orf8Q96DM3 657 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
SYNE2-215ENST00000554997 TRMT2BQ96GJ1 504 aaKnown RBP10.75□□□□□ -0.69
SYNE2-215ENST00000554997 VCPIP1Q96JH7 1222 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 MYRFLQ96LU7 910 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 MIS12Q9H081 205 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 ISCUQ9H1K1 167 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 DEF6Q9H4E7 631 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 FBXO44Q9H4M3 255 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 LRRC4Q9HBW1 653 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 CLEC1BQ9P126 229 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 NAGPAQ9UK23 515 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 EPN1Q9Y6I3 576 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-215ENST00000554997 TSC2P49815 1807 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 RFPL2O75678 378 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 FBXO21O94952 628 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 LCA5LO95447 670 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 ZBED1O96006 694 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 FOSL2P15408 326 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 HMGA1P17096 107 aaKnown RBP10.74□□□□□ -0.69
SYNE2-215ENST00000554997 LTBRP36941 435 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 NSFP46459 744 aaKnown RBP10.74□□□□□ -0.69
SYNE2-215ENST00000554997 PPP3CCP48454 512 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 RGS7P49802 495 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 SLC5A3P53794 718 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 GFPT1Q06210 699 aaPredicted RBP10.74□□□□□ -0.69
SYNE2-215ENST00000554997 PDCLQ13371 301 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 ZNF268Q14587 947 aaPredicted RBP10.74□□□□□ -0.69
SYNE2-215ENST00000554997 TAF12Q16514 161 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 CCDC122Q5T0U0 273 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 C10orf76Q5T2E6 689 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 SYCE2Q6PIF2 218 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 ZDHHC17Q8IUH5 632 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 C12orf76Q8N812 135 aaPredicted RBP10.74□□□□□ -0.69
SYNE2-215ENST00000554997 MSANTD4Q8NCY6 345 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 SCAMP5Q8TAC9 235 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 ZNF707Q96C28 371 aaPredicted RBP10.74□□□□□ -0.69
SYNE2-215ENST00000554997 CPXM1Q96SM3 734 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 TTLL2Q9BWV7 592 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 LRRC3Q9BY71 257 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 S1PR5Q9H228 398 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 SFXN1Q9H9B4 322 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 CNGB3Q9NQW8 809 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 ST7Q9NRC1 585 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 ADAM22Q9P0K1 906 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 NENFQ9UMX5 172 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 SCML2Q9UQR0 700 aa10.74□□□□□ -0.69
SYNE2-215ENST00000554997 COL6A3P12111 3177 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 CHD7Q9P2D1 2997 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 SOWAHDA6NJG2 315 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 SPDYE4A6NLX3 237 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 TMCO5BA8MYB1 307 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 EIF3CLB5ME19 914 aaKnown RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 E5RJQ4 531 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 CCL16O15467 120 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 FGF19O95750 216 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 PTMAP06454 111 aaKnown RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 USP17L7P0C7H9 530 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 LCP1P13796 627 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 CYLC1P35663 651 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 USP46P62068 366 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 MRPS5P82675 430 aaKnown RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 ITIH3Q06033 890 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 PTP4A2Q12974 167 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 CCDC85BQ15834 202 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 PTPN20Q4JDL3 420 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 PABPC1LQ4VXU2 614 aaKnown RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 CYP4A22Q5TCH4 519 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 RAD9BQ6WBX8 426 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 GPRIN1Q7Z2K8 1008 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 GPR149Q86SP6 731 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 MON1AQ86VX9 555 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 MCOLN2Q8IZK6 566 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms