RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 RNF214Q8ND24 703 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 ABHD4Q8TB40 342 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 KIFAP3Q92845 792 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 CASP10Q92851 521 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 DHX58Q96C10 678 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 ACSF2Q96CM8 615 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-231ENST00000554994 PGBD4Q96DM1 585 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 DRC1Q96MC2 740 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 CEP89Q96ST8 783 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 TCF25Q9BQ70 676 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 MMTAG2Q9BU76 263 aaKnown RBP5.09□□□□□ -1.59
ATXN3-231ENST00000554994 KIFC3Q9BVG8 833 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 MINDY3Q9H8M7 445 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 IFT122Q9HBG6 1241 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 ABCB6Q9NP58 842 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 XPNPEP1Q9NQW7 623 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 CHST12Q9NRB3 414 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 KRT82Q9NSB4 513 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 TYW1Q9NV66 732 aaKnown RBP5.09□□□□□ -1.59
ATXN3-231ENST00000554994 FBXO2Q9UK22 296 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-231ENST00000554994 FBXO4Q9UKT5 387 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 WASF3Q9UPY6 502 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 GDAQ9Y2T3 454 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 MTF2Q9Y483 593 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-231ENST00000554994 PCDHB2Q9Y5E7 798 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 PCDHB12Q9Y5F1 795 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 ATP6V1DQ9Y5K8 247 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 HCFC2Q9Y5Z7 792 aa5.09□□□□□ -1.59
ATXN3-231ENST00000554994 DMXL2Q8TDJ6 3036 aa5.09□□□□□ -1.6
ATXN3-231ENST00000554994 ASXL3Q9C0F0 2248 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 SCN1AP35498 2009 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 A0A1B0GVL5 298 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 C9IYK1 514 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 NT5C1B-RDH14C9J2C7 533 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 H3BS24 57 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 POLR2DO15514 142 aaKnown RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 B4GALT5O43286 388 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 TBCAO75347 108 aaKnown RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 FGF18O76093 207 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 POMCP01189 267 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 PRKCBP05771 671 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 MED14OSP0DP75 135 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 ARF4P18085 180 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 AKAP5P24588 427 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 KRT85P78386 507 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 NUCB2P80303 420 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 SRSF5Q13243 272 aaKnown RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 DMP1Q13316 513 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 DSC3Q14574 896 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 UBXN2BQ14CS0 331 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 ATAT1Q5SQI0 421 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 STPG1Q5TH74 334 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 PHLDB3Q6NSJ2 640 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 NOTUMQ6P988 496 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 DCLRE1AQ6PJP8 1040 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 GLB1LQ6UWU2 654 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 CCDC73Q6ZRK6 1079 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 CCDC149Q6ZUS6 474 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 C1orf186Q6ZWK4 172 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 APBB1IPQ7Z5R6 666 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 CMTR2Q8IYT2 770 aaKnown RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 HACE1Q8IYU2 909 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 SYCP3Q8IZU3 236 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 LINC00301Q8NCQ3 95 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 URGCPQ8TCY9 931 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 HNRNPLLQ8WVV9 542 aaKnown RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 LINC01599Q8WXQ3 324 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 LARP4BQ92615 738 aaKnown RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 RAD54LQ92698 747 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 LRIG1Q96JA1 1093 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 ADPGKQ9BRR6 497 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 EIF2AQ9BY44 585 aaKnown RBP5.08□□□□□ -1.6
ATXN3-231ENST00000554994 BCO2Q9BYV7 579 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 C2orf40Q9H1Z8 148 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 TMEM161AQ9NX61 479 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 SLAMF8Q9P0V8 285 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 PCDHA7Q9UN72 937 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 HES2Q9Y543 173 aa5.08□□□□□ -1.6
ATXN3-231ENST00000554994 PATJQ8NI35 1801 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 A0A0U1RQF3 1178 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 FSD2A1L4K1 749 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 K7ENM7 598 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 N4BP3O15049 544 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 TSPAN1O60635 241 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 N4BP1O75113 896 aaKnown RBP5.07□□□□□ -1.6
ATXN3-231ENST00000554994 CLASP2O75122 1294 aaKnown RBP5.07□□□□□ -1.6
ATXN3-231ENST00000554994 ZC3H11AO75152 810 aaKnown RBP eCLIP5.07□□□□□ -1.6
ATXN3-231ENST00000554994 PPP6R2O75170 966 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 YEATS4O95619 227 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 ALDH2P05091 517 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 SRFP11831 508 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 PLS3P13797 630 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 RAC2P15153 192 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 EPCAMP16422 314 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 CD72P21854 359 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 GLDCP23378 1020 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 NMT1P30419 496 aaKnown RBP5.07□□□□□ -1.6
ATXN3-231ENST00000554994 AXLP30530 894 aa5.07□□□□□ -1.6
ATXN3-231ENST00000554994 HOXA11P31270 313 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms