RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 CDK18Q07002 472 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 RNF187Q5TA31 235 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 SLC44A1Q8WWI5 657 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 ZBTB10Q96DT7 871 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 SMIM23A6NLE4 172 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 RASA4BC9J798 803 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 RASA4O43374 803 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 SUN1O94901 812 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 TGDSO95455 350 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 SRGAP2CP0DJJ0 459 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 STIP1P31948 543 aaKnown RBP13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 NF2P35240 595 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 EFTUD2Q15029 972 aaKnown RBP eCLIP13.19□□□□□ -0.37e-10■■■■□ 23.8
PPP4R3A-206ENST00000554943 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 CAND1Q86VP6 1230 aaKnown RBP13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 SH3TC2Q8TF17 1288 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 ACSF2Q96CM8 615 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 CNPY3Q9BT09 278 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 TRABDQ9H4I3 376 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 MORF4L1Q9UBU8 362 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 USTQ9Y2C2 406 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 CST8O60676 142 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 CSRP3P50461 194 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 KCNJ2P63252 427 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 HIF1AQ16665 826 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 ARTNQ5T4W7 220 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 FAM183BPQ6ZVS7 135 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 SRRM1Q8IYB3 904 aaKnown RBP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 MCUQ8NE86 351 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 OLFM3Q96PB7 478 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 RNF157Q96PX1 679 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 VPS11Q9H270 941 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 POPDC2Q9HBU9 364 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 CD248Q9HCU0 757 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 PLXNA3P51805 1871 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 MYLKQ15746 1914 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 HMX2A2RU54 273 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 BANF1O75531 89 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 TOMM70O94826 608 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 TGM2P21980 687 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 PTPN9P43378 593 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 PSMC4P43686 418 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 CLCN3P51790 818 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 PSMC1P62191 440 aaKnown RBP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 OTUD1Q5VV17 481 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 TTC30AQ86WT1 665 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 ANKRD13AQ8IZ07 590 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 MMP19Q99542 508 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 EXOC1LA0A1B0GW35 172 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 MBLAC1A4D2B0 266 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 GSRP00390 522 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 ITGB3P05106 788 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 LAMC2Q13753 1193 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 PDK2Q15119 407 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 FAM47CQ5HY64 1035 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 ZNF667Q5HYK9 610 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 STEAP4Q687X5 459 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 NCAPG2Q86XI2 1143 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 KLHDC8BQ8IXV7 354 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 GTF3C2Q8WUA4 911 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 INPP5DQ92835 1189 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 SNX27Q96L92 541 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 TSPAN18Q96SJ8 248 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 CCDC77Q9BR77 488 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 FRMD8Q9BZ67 464 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 ZNF148Q9UQR1 794 aa13.18□□□□□ -0.3
PPP4R3A-206ENST00000554943 LRRD1A4D1F6 860 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 C2CD2LO14523 706 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 GSTA2P09210 222 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 INSRRP14616 1297 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 IFNAR2P48551 515 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 SNCBQ16143 134 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 DPYSL2Q16555 572 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 CES4AQ5XG92 561 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 ZNF410Q86VK4 478 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 GPATCH11Q8N954 259 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 ZC3H15Q8WU90 426 aaKnown RBP13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 DPF3Q92784 378 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 TBCBQ99426 244 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 ZNF670Q9BS34 389 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 ASB14A6NK59 587 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 HGSO14964 777 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 ALDH1A2O94788 518 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 PHKA2P46019 1235 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 TFAMQ00059 246 aaKnown RBP13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 IL9RQ01113 521 aa13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 PRKD1Q15139 912 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
PPP4R3A-206ENST00000554943 STILQ15468 1287 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms